Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
NKX2-2O95096 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NKX2-2O95096 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.71□□□□□ -1.5
NKX2-2O95096 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NKX2-2O95096 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NKX2-2O95096 MIR188-201ENST00000385034 86 ntBASIC5.71□□□□□ -1.5
NKX2-2O95096 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NKX2-2O95096 CCNB2P1-201ENST00000399411 1150 ntBASIC5.71□□□□□ -1.5
NKX2-2O95096 ST13P16-201ENST00000401760 781 ntBASIC5.71□□□□□ -1.5
NKX2-2O95096 UBE2V1P15-201ENST00000407776 448 ntBASIC5.71□□□□□ -1.5
NKX2-2O95096 AC015977.1-201ENST00000418887 292 ntBASIC5.71□□□□□ -1.5
NKX2-2O95096 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NKX2-2O95096 AC016027.5-201ENST00000427227 210 ntBASIC5.71□□□□□ -1.5
NKX2-2O95096 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.71□□□□□ -1.5
NKX2-2O95096 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.71□□□□□ -1.5
NKX2-2O95096 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.71□□□□□ -1.5
NKX2-2O95096 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.71□□□□□ -1.5
NKX2-2O95096 AC098818.1-201ENST00000478593 252 ntBASIC5.71□□□□□ -1.5
NKX2-2O95096 RPL29P23-201ENST00000486188 442 ntBASIC5.71□□□□□ -1.5
NKX2-2O95096 AL035690.1-201ENST00000490892 383 ntBASIC5.71□□□□□ -1.5
NKX2-2O95096 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.71□□□□□ -1.5
NKX2-2O95096 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.71□□□□□ -1.5
NKX2-2O95096 RNA5SP434-201ENST00000516647 121 ntBASIC5.71□□□□□ -1.5
NKX2-2O95096 AC008429.4-201ENST00000521201 182 ntBASIC5.71□□□□□ -1.5
NKX2-2O95096 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.71□□□□□ -1.5
NKX2-2O95096 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.71□□□□□ -1.5
NKX2-2O95096 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.71□□□□□ -1.5
NKX2-2O95096 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.71□□□□□ -1.5
NKX2-2O95096 AC008147.3-201ENST00000548666 354 ntBASIC5.71□□□□□ -1.5
NKX2-2O95096 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.71□□□□□ -1.5
NKX2-2O95096 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.71□□□□□ -1.5
NKX2-2O95096 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NKX2-2O95096 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.71□□□□□ -1.5
NKX2-2O95096 RNU4ATAC-201ENST00000580972 127 ntBASIC5.71□□□□□ -1.5
NKX2-2O95096 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.71□□□□□ -1.5
NKX2-2O95096 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.71□□□□□ -1.5
NKX2-2O95096 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.71□□□□□ -1.5
NKX2-2O95096 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.71□□□□□ -1.5
NKX2-2O95096 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.71□□□□□ -1.5
NKX2-2O95096 AC011500.1-201ENST00000601963 469 ntBASIC5.71□□□□□ -1.5
NKX2-2O95096 AC007423.1-201ENST00000605009 627 ntBASIC5.71□□□□□ -1.5
NKX2-2O95096 AC012213.4-201ENST00000606457 354 ntBASIC5.71□□□□□ -1.5
NKX2-2O95096 AC141002.1-201ENST00000607025 279 ntBASIC5.71□□□□□ -1.5
NKX2-2O95096 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.71□□□□□ -1.5
NKX2-2O95096 AC015922.4-201ENST00000612568 690 ntBASIC5.71□□□□□ -1.5
NKX2-2O95096 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.71□□□□□ -1.5
NKX2-2O95096 AC006453.5-201ENST00000636451 619 ntBASIC5.71□□□□□ -1.5
NKX2-2O95096 AC068769.1-201ENST00000474767 2426 ntBASIC5.71□□□□□ -1.5
NKX2-2O95096 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.71□□□□□ -1.5
NKX2-2O95096 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
NKX2-2O95096 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
NKX2-2O95096 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NKX2-2O95096 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.71□□□□□ -1.5
NKX2-2O95096 AC092111.2-201ENST00000611627 1414 ntBASIC5.71□□□□□ -1.5
NKX2-2O95096 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.71□□□□□ -1.5
NKX2-2O95096 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
NKX2-2O95096 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.71□□□□□ -1.5
NKX2-2O95096 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
NKX2-2O95096 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NKX2-2O95096 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
NKX2-2O95096 AC116158.1-201ENST00000560231 2129 ntBASIC5.71□□□□□ -1.5
NKX2-2O95096 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
NKX2-2O95096 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NKX2-2O95096 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.71□□□□□ -1.5
NKX2-2O95096 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
NKX2-2O95096 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NKX2-2O95096 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
NKX2-2O95096 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.7□□□□□ -1.5
NKX2-2O95096 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
NKX2-2O95096 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NKX2-2O95096 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.7□□□□□ -1.5
NKX2-2O95096 MTCO1P28-201ENST00000574177 1528 ntBASIC5.7□□□□□ -1.5
NKX2-2O95096 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
NKX2-2O95096 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.7□□□□□ -1.5
NKX2-2O95096 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC5.7□□□□□ -1.5
NKX2-2O95096 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.7□□□□□ -1.5
NKX2-2O95096 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.7□□□□□ -1.5
NKX2-2O95096 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NKX2-2O95096 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NKX2-2O95096 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
NKX2-2O95096 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.7□□□□□ -1.5
NKX2-2O95096 OR6K3-202ENST00000368146 996 ntBASIC5.7□□□□□ -1.5
NKX2-2O95096 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.7□□□□□ -1.5
NKX2-2O95096 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.7□□□□□ -1.5
NKX2-2O95096 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.7□□□□□ -1.5
NKX2-2O95096 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NKX2-2O95096 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.7□□□□□ -1.5
NKX2-2O95096 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.7□□□□□ -1.5
NKX2-2O95096 RPSAP32-201ENST00000432681 526 ntBASIC5.7□□□□□ -1.5
NKX2-2O95096 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.7□□□□□ -1.5
NKX2-2O95096 Z99127.2-201ENST00000441426 334 ntBASIC5.7□□□□□ -1.5
NKX2-2O95096 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.7□□□□□ -1.5
NKX2-2O95096 RPL23AP60-201ENST00000450011 454 ntBASIC5.7□□□□□ -1.5
NKX2-2O95096 RAB28P2-201ENST00000454299 641 ntBASIC5.7□□□□□ -1.5
NKX2-2O95096 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.7□□□□□ -1.5
NKX2-2O95096 AL355032.1-201ENST00000472981 438 ntBASIC5.7□□□□□ -1.5
NKX2-2O95096 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.7□□□□□ -1.5
NKX2-2O95096 RPS27P20-201ENST00000492051 246 ntBASIC5.7□□□□□ -1.5
NKX2-2O95096 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.7□□□□□ -1.5
NKX2-2O95096 RN7SL568P-201ENST00000493069 298 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms