Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC2.51□□□□□ -2.01
USH2AO75445 AC022916.3-201ENST00000592961 742 ntBASIC2.51□□□□□ -2.01
USH2AO75445 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.51□□□□□ -2.01
USH2AO75445 ZNF365-211ENST00000614806 877 ntTSL 5 BASIC2.51□□□□□ -2.01
USH2AO75445 PHACTR1-205ENST00000379350 4784 ntTSL 2 BASIC2.51□□□□□ -2.01
USH2AO75445 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC2.51□□□□□ -2.01
USH2AO75445 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
USH2AO75445 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC2.51□□□□□ -2.01
USH2AO75445 SON-203ENST00000381679 7860 ntTSL 5 BASIC2.51□□□□□ -2.01
USH2AO75445 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC2.51□□□□□ -2.01
USH2AO75445 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
USH2AO75445 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
USH2AO75445 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 AC009948.3-201ENST00000603415 1798 ntBASIC2.5□□□□□ -2.01
USH2AO75445 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC2.5□□□□□ -2.01
USH2AO75445 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC2.5□□□□□ -2.01
USH2AO75445 KIAA1217-207ENST00000396445 5706 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 PCSK1-201ENST00000311106 5086 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 RN7SKP224-201ENST00000364140 325 ntBASIC2.5□□□□□ -2.01
USH2AO75445 ST13P16-201ENST00000401760 781 ntBASIC2.5□□□□□ -2.01
USH2AO75445 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC2.5□□□□□ -2.01
USH2AO75445 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC2.5□□□□□ -2.01
USH2AO75445 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC2.5□□□□□ -2.01
USH2AO75445 ZRANB2-AS1-202ENST00000450461 553 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 Z92846.1-201ENST00000456203 268 ntBASIC2.5□□□□□ -2.01
USH2AO75445 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC2.5□□□□□ -2.01
USH2AO75445 RN7SKP92-201ENST00000517266 244 ntBASIC2.5□□□□□ -2.01
USH2AO75445 KC877982.1-201ENST00000602313 470 ntBASIC2.5□□□□□ -2.01
USH2AO75445 AL391358.1-201ENST00000605342 190 ntBASIC2.5□□□□□ -2.01
USH2AO75445 PAN2-221ENST00000610546 5301 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
USH2AO75445 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
USH2AO75445 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 NLRC5-203ENST00000436936 6724 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
USH2AO75445 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
USH2AO75445 SBF2-201ENST00000256190 7439 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
USH2AO75445 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 AC232271.1-201ENST00000602455 2715 ntBASIC2.5□□□□□ -2.01
USH2AO75445 CCDC144B-208ENST00000618081 8688 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 TRPS1-201ENST00000220888 5480 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 NRP1-208ENST00000395995 5826 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC2.5□□□□□ -2.01
USH2AO75445 TEX41-205ENST00000431734 529 ntTSL 4 BASIC2.5□□□□□ -2.01
USH2AO75445 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC2.5□□□□□ -2.01
USH2AO75445 AC104164.1-201ENST00000460282 590 ntBASIC2.5□□□□□ -2.01
USH2AO75445 AC091965.3-201ENST00000506236 208 ntBASIC2.5□□□□□ -2.01
USH2AO75445 OR6M2P-201ENST00000529831 871 ntBASIC2.5□□□□□ -2.01
USH2AO75445 AC009643.1-201ENST00000532030 391 ntBASIC2.5□□□□□ -2.01
USH2AO75445 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC2.5□□□□□ -2.01
USH2AO75445 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC2.5□□□□□ -2.01
USH2AO75445 RAD51D-202ENST00000345365 9988 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
USH2AO75445 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC2.5□□□□□ -2.01
USH2AO75445 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC2.5□□□□□ -2.01
USH2AO75445 BSN-201ENST00000296452 15955 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC2.5□□□□□ -2.01
USH2AO75445 DZIP1-201ENST00000347108 7068 ntAPPRIS P4 TSL 5 BASIC2.5□□□□□ -2.01
USH2AO75445 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
USH2AO75445 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 LAMA4-201ENST00000230538 6547 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 LRRC37A4P-202ENST00000581296 5372 ntBASIC2.5□□□□□ -2.01
USH2AO75445 IMMTP1-201ENST00000435590 2219 ntBASIC2.5□□□□□ -2.01
USH2AO75445 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC2.5□□□□□ -2.01
USH2AO75445 RPL5P25-201ENST00000441148 775 ntBASIC2.5□□□□□ -2.01
USH2AO75445 MRPS33P2-201ENST00000507850 322 ntBASIC2.5□□□□□ -2.01
USH2AO75445 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 MIR3667-201ENST00000581025 74 ntBASIC2.5□□□□□ -2.01
USH2AO75445 RN7SL690P-201ENST00000582087 240 ntBASIC2.5□□□□□ -2.01
USH2AO75445 AC024941.1-201ENST00000612250 334 ntBASIC2.5□□□□□ -2.01
USH2AO75445 AC112694.2-201ENST00000623697 768 ntBASIC2.5□□□□□ -2.01
USH2AO75445 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC2.5□□□□□ -2.01
USH2AO75445 OPA3-201ENST00000263275 7828 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 DZIP1-202ENST00000361156 7011 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
USH2AO75445 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC2.5□□□□□ -2.01
USH2AO75445 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 SPATA31C1-201ENST00000420021 3895 ntBASIC2.5□□□□□ -2.01
USH2AO75445 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC2.5□□□□□ -2.01
USH2AO75445 MFSD8-220ENST00000641243 1422 ntBASIC2.5□□□□□ -2.01
USH2AO75445 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
USH2AO75445 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC2.5□□□□□ -2.01
USH2AO75445 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC2.5□□□□□ -2.01
USH2AO75445 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
USH2AO75445 GPR155-203ENST00000392552 6730 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms