Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.68□□□□□ -1.34
FOXN3O00409 EIF4A2P2-201ENST00000455776 1070 ntBASIC6.68□□□□□ -1.34
FOXN3O00409 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.68□□□□□ -1.34
FOXN3O00409 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.68□□□□□ -1.34
FOXN3O00409 KHDC1P1-201ENST00000511053 508 ntBASIC6.68□□□□□ -1.34
FOXN3O00409 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.68□□□□□ -1.34
FOXN3O00409 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC6.68□□□□□ -1.34
FOXN3O00409 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.68□□□□□ -1.34
FOXN3O00409 AP001858.2-201ENST00000536213 601 ntBASIC6.68□□□□□ -1.34
FOXN3O00409 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC6.68□□□□□ -1.34
FOXN3O00409 CR383656.14-201ENST00000551951 406 ntBASIC6.68□□□□□ -1.34
FOXN3O00409 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.68□□□□□ -1.34
FOXN3O00409 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.68□□□□□ -1.34
FOXN3O00409 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.68□□□□□ -1.34
FOXN3O00409 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC6.68□□□□□ -1.34
FOXN3O00409 AL450270.1-201ENST00000606160 391 ntBASIC6.68□□□□□ -1.34
FOXN3O00409 AL591167.1-201ENST00000607321 456 ntBASIC6.68□□□□□ -1.34
FOXN3O00409 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC6.68□□□□□ -1.34
FOXN3O00409 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6.68□□□□□ -1.34
FOXN3O00409 AC006249.1-201ENST00000621223 471 ntBASIC6.68□□□□□ -1.34
FOXN3O00409 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.68□□□□□ -1.34
FOXN3O00409 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
FOXN3O00409 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
FOXN3O00409 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
FOXN3O00409 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
FOXN3O00409 AC005725.1-201ENST00000577346 2607 ntBASIC6.68□□□□□ -1.34
FOXN3O00409 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
FOXN3O00409 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
FOXN3O00409 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
FOXN3O00409 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
FOXN3O00409 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.68□□□□□ -1.34
FOXN3O00409 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.68□□□□□ -1.34
FOXN3O00409 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
FOXN3O00409 AL121768.1-201ENST00000613917 2544 ntBASIC6.68□□□□□ -1.34
FOXN3O00409 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
FOXN3O00409 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
FOXN3O00409 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
FOXN3O00409 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
FOXN3O00409 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.67□□□□□ -1.34
FOXN3O00409 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
FOXN3O00409 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
FOXN3O00409 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.67□□□□□ -1.34
FOXN3O00409 AL662795.2-201ENST00000624252 3706 ntBASIC6.67□□□□□ -1.34
FOXN3O00409 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
FOXN3O00409 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
FOXN3O00409 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
FOXN3O00409 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
FOXN3O00409 RPL11P4-201ENST00000332269 436 ntBASIC6.67□□□□□ -1.34
FOXN3O00409 RNU1-49P-201ENST00000363468 159 ntBASIC6.67□□□□□ -1.34
FOXN3O00409 SNORA43.1-201ENST00000364863 140 ntBASIC6.67□□□□□ -1.34
FOXN3O00409 SNORA64.3-201ENST00000365647 134 ntBASIC6.67□□□□□ -1.34
FOXN3O00409 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.67□□□□□ -1.34
FOXN3O00409 YWHAZP4-201ENST00000392459 708 ntBASIC6.67□□□□□ -1.34
FOXN3O00409 AC007068.1-201ENST00000396690 844 ntBASIC6.67□□□□□ -1.34
FOXN3O00409 RN7SKP151-201ENST00000410230 316 ntBASIC6.67□□□□□ -1.34
FOXN3O00409 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.67□□□□□ -1.34
FOXN3O00409 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.67□□□□□ -1.34
FOXN3O00409 AL354707.3-201ENST00000427308 331 ntBASIC6.67□□□□□ -1.34
FOXN3O00409 AC073508.1-201ENST00000428866 656 ntBASIC6.67□□□□□ -1.34
FOXN3O00409 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.67□□□□□ -1.34
FOXN3O00409 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.67□□□□□ -1.34
FOXN3O00409 RPL12P49-201ENST00000441100 121 ntBASIC6.67□□□□□ -1.34
FOXN3O00409 POU5F1P5-201ENST00000445059 658 ntBASIC6.67□□□□□ -1.34
FOXN3O00409 AC234771.2-201ENST00000445718 597 ntBASIC6.67□□□□□ -1.34
FOXN3O00409 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.67□□□□□ -1.34
FOXN3O00409 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.67□□□□□ -1.34
FOXN3O00409 PPP1R11P1-201ENST00000486095 376 ntBASIC6.67□□□□□ -1.34
FOXN3O00409 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.67□□□□□ -1.34
FOXN3O00409 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC6.67□□□□□ -1.34
FOXN3O00409 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.67□□□□□ -1.34
FOXN3O00409 NACAP5-201ENST00000509863 636 ntBASIC6.67□□□□□ -1.34
FOXN3O00409 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.67□□□□□ -1.34
FOXN3O00409 CYCSP25-201ENST00000525280 316 ntBASIC6.67□□□□□ -1.34
FOXN3O00409 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.67□□□□□ -1.34
FOXN3O00409 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.67□□□□□ -1.34
FOXN3O00409 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.67□□□□□ -1.34
FOXN3O00409 AC092865.1-201ENST00000544395 1023 ntBASIC6.67□□□□□ -1.34
FOXN3O00409 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.67□□□□□ -1.34
FOXN3O00409 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.67□□□□□ -1.34
FOXN3O00409 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.67□□□□□ -1.34
FOXN3O00409 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
FOXN3O00409 AC018558.5-201ENST00000565840 952 ntBASIC6.67□□□□□ -1.34
FOXN3O00409 AC090651.1-201ENST00000567865 634 ntBASIC6.67□□□□□ -1.34
FOXN3O00409 AC122134.1-202ENST00000569111 1201 ntBASIC6.67□□□□□ -1.34
FOXN3O00409 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC6.67□□□□□ -1.34
FOXN3O00409 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.67□□□□□ -1.34
FOXN3O00409 MIMT1-201ENST00000597105 1050 ntBASIC6.67□□□□□ -1.34
FOXN3O00409 AC125494.2-201ENST00000602431 657 ntBASIC6.67□□□□□ -1.34
FOXN3O00409 AC027334.1-201ENST00000603257 310 ntBASIC6.67□□□□□ -1.34
FOXN3O00409 AC012213.4-201ENST00000606457 354 ntBASIC6.67□□□□□ -1.34
FOXN3O00409 SNORA74.4-201ENST00000607595 199 ntBASIC6.67□□□□□ -1.34
FOXN3O00409 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
FOXN3O00409 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
FOXN3O00409 AL122023.1-201ENST00000622847 530 ntBASIC6.67□□□□□ -1.34
FOXN3O00409 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.67□□□□□ -1.34
FOXN3O00409 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC6.67□□□□□ -1.34
FOXN3O00409 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
FOXN3O00409 CCNT2P1-201ENST00000423082 1315 ntBASIC6.67□□□□□ -1.34
FOXN3O00409 SSXP3-201ENST00000442971 1300 ntBASIC6.67□□□□□ -1.34
FOXN3O00409 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms