Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC188H7C350 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC188H7C350 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC188H7C350 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC188H7C350 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.19□□□□□ -1.42
CCDC188H7C350 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC188H7C350 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC188H7C350 AC022325.1-201ENST00000502748 2199 ntBASIC6.19□□□□□ -1.42
CCDC188H7C350 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC188H7C350 AL589994.1-201ENST00000404962 340 ntBASIC6.19□□□□□ -1.42
CCDC188H7C350 AL117344.1-201ENST00000407196 616 ntBASIC6.19□□□□□ -1.42
CCDC188H7C350 RNA5SP156-201ENST00000410250 110 ntBASIC6.19□□□□□ -1.42
CCDC188H7C350 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC188H7C350 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC188H7C350 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC188H7C350 AC092646.1-201ENST00000427142 901 ntBASIC6.19□□□□□ -1.42
CCDC188H7C350 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC188H7C350 NPM1P18-201ENST00000434232 732 ntBASIC6.19□□□□□ -1.42
CCDC188H7C350 AC242426.1-201ENST00000435270 960 ntBASIC6.19□□□□□ -1.42
CCDC188H7C350 REG1CP-206ENST00000447469 496 ntBASIC6.19□□□□□ -1.42
CCDC188H7C350 SNRPCP3-201ENST00000474888 476 ntBASIC6.19□□□□□ -1.42
CCDC188H7C350 TRBV8-1-201ENST00000481590 279 ntBASIC6.19□□□□□ -1.42
CCDC188H7C350 RPL38P3-201ENST00000484463 213 ntBASIC6.19□□□□□ -1.42
CCDC188H7C350 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC188H7C350 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC188H7C350 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC188H7C350 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC188H7C350 AC021269.1-201ENST00000526860 705 ntBASIC6.19□□□□□ -1.42
CCDC188H7C350 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC188H7C350 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC188H7C350 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC188H7C350 AC135626.1-201ENST00000556983 435 ntBASIC6.19□□□□□ -1.42
CCDC188H7C350 AC037479.1-201ENST00000558361 625 ntBASIC6.19□□□□□ -1.42
CCDC188H7C350 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC188H7C350 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC188H7C350 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC188H7C350 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC188H7C350 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC188H7C350 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC188H7C350 AL445670.1-201ENST00000618889 801 ntBASIC6.19□□□□□ -1.42
CCDC188H7C350 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC188H7C350 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC188H7C350 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
CCDC188H7C350 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC188H7C350 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC188H7C350 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC188H7C350 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC188H7C350 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
CCDC188H7C350 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
CCDC188H7C350 RNF19BPY-201ENST00000458209 1550 ntBASIC6.18□□□□□ -1.42
CCDC188H7C350 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
CCDC188H7C350 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC188H7C350 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC188H7C350 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC188H7C350 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC188H7C350 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC188H7C350 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC188H7C350 RNA5SP485-201ENST00000365053 119 ntBASIC6.18□□□□□ -1.42
CCDC188H7C350 RNA5SP85-201ENST00000365378 119 ntBASIC6.18□□□□□ -1.42
CCDC188H7C350 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC6.18□□□□□ -1.42
CCDC188H7C350 MIR431-201ENST00000385266 114 ntBASIC6.18□□□□□ -1.42
CCDC188H7C350 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CCDC188H7C350 AL033519.1-201ENST00000407266 307 ntBASIC6.18□□□□□ -1.42
CCDC188H7C350 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC188H7C350 AC006509.1-201ENST00000420788 634 ntBASIC6.18□□□□□ -1.42
CCDC188H7C350 RPL12P12-201ENST00000424633 501 ntBASIC6.18□□□□□ -1.42
CCDC188H7C350 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC188H7C350 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC188H7C350 AC099677.3-201ENST00000427081 395 ntBASIC6.18□□□□□ -1.42
CCDC188H7C350 OR6R1P-201ENST00000431838 940 ntBASIC6.18□□□□□ -1.42
CCDC188H7C350 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC188H7C350 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC188H7C350 LDHAP2-201ENST00000437325 985 ntBASIC6.18□□□□□ -1.42
CCDC188H7C350 AL158214.1-201ENST00000444423 404 ntBASIC6.18□□□□□ -1.42
CCDC188H7C350 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC188H7C350 AC097359.1-201ENST00000447946 463 ntBASIC6.18□□□□□ -1.42
CCDC188H7C350 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC188H7C350 EIF3LP2-201ENST00000457262 807 ntBASIC6.18□□□□□ -1.42
CCDC188H7C350 RN7SL39P-201ENST00000462264 297 ntBASIC6.18□□□□□ -1.42
CCDC188H7C350 RN7SL197P-201ENST00000466981 299 ntBASIC6.18□□□□□ -1.42
CCDC188H7C350 AC083795.1-201ENST00000491760 320 ntBASIC6.18□□□□□ -1.42
CCDC188H7C350 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC188H7C350 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.18□□□□□ -1.42
CCDC188H7C350 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC188H7C350 KCTD9P6-201ENST00000522306 950 ntBASIC6.18□□□□□ -1.42
CCDC188H7C350 MTND2P17-201ENST00000550281 688 ntBASIC6.18□□□□□ -1.42
CCDC188H7C350 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.18□□□□□ -1.42
CCDC188H7C350 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC188H7C350 VN1R81P-201ENST00000602085 372 ntBASIC6.18□□□□□ -1.42
CCDC188H7C350 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.18□□□□□ -1.42
CCDC188H7C350 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC188H7C350 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC188H7C350 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC188H7C350 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC188H7C350 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC188H7C350 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC188H7C350 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC188H7C350 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC188H7C350 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
CCDC188H7C350 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms