Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 AC092967.1-201ENST00000449016 481 ntBASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 RPL17P2-201ENST00000491913 451 ntBASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 AL158068.1-201ENST00000506116 616 ntBASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 AC025423.2-201ENST00000537570 439 ntBASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 AL121579.2-201ENST00000555466 590 ntBASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 AC010547.7-201ENST00000570323 333 ntBASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 AC024589.2-201ENST00000605642 1294 ntBASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 AC138473.1-201ENST00000605717 526 ntBASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 AC006924.1-201ENST00000610750 559 ntBASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 AC010998.3-201ENST00000613871 631 ntBASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 AL512652.1-201ENST00000619006 500 ntBASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 AC008957.3-201ENST00000624112 2242 ntBASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 MTCO1P28-201ENST00000574177 1528 ntBASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 AL132656.3-201ENST00000606384 1595 ntBASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NPIPA3F8WFD2 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 RNU1-134P-201ENST00000362935 165 ntBASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 MIR433-201ENST00000384837 93 ntBASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 AC092642.1-201ENST00000392417 425 ntBASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 AC007568.1-201ENST00000422912 471 ntBASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 SETP9-201ENST00000423837 832 ntBASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 AC130360.1-201ENST00000425489 1117 ntBASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 PPIAP10-201ENST00000438675 458 ntBASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 RANP2-201ENST00000456833 229 ntBASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 AC128716.1-201ENST00000475129 166 ntBASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 FTH1P8-201ENST00000498161 514 ntBASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 AC006499.4-201ENST00000510947 694 ntBASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 Y_RNA.710-201ENST00000516975 110 ntBASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 TRIM77BP-201ENST00000524985 1119 ntBASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 AC130365.2-201ENST00000525882 1201 ntBASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 VN1R81P-201ENST00000602085 372 ntBASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 AC090953.1-201ENST00000604305 1092 ntBASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 SNX18P12-201ENST00000624821 759 ntBASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 AC008691.1-209ENST00000642094 814 ntBASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 GUCY1B2-204ENST00000531898 1979 ntBASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
NPIPA3F8WFD2 MAPK10-287ENST00000641217 3037 ntBASIC5.61□□□□□ -1.51
NPIPA3F8WFD2 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 194.8 ms