Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC4.44□□□□□ -1.7
NACAE9PAV3 AC119674.1-202ENST00000641333 1860 ntBASIC4.44□□□□□ -1.7
NACAE9PAV3 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.44□□□□□ -1.7
NACAE9PAV3 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NACAE9PAV3 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NACAE9PAV3 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC4.44□□□□□ -1.7
NACAE9PAV3 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC4.44□□□□□ -1.7
NACAE9PAV3 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC4.44□□□□□ -1.7
NACAE9PAV3 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.44□□□□□ -1.7
NACAE9PAV3 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC4.44□□□□□ -1.7
NACAE9PAV3 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.44□□□□□ -1.7
NACAE9PAV3 GUCY1B2-204ENST00000531898 1979 ntBASIC4.44□□□□□ -1.7
NACAE9PAV3 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NACAE9PAV3 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC4.44□□□□□ -1.7
NACAE9PAV3 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
NACAE9PAV3 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NACAE9PAV3 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NACAE9PAV3 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
NACAE9PAV3 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
NACAE9PAV3 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC4.44□□□□□ -1.7
NACAE9PAV3 PSMA6P1-201ENST00000400275 741 ntBASIC4.44□□□□□ -1.7
NACAE9PAV3 AL121835.1-201ENST00000404250 354 ntBASIC4.44□□□□□ -1.7
NACAE9PAV3 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NACAE9PAV3 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC4.44□□□□□ -1.7
NACAE9PAV3 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.44□□□□□ -1.7
NACAE9PAV3 AC099782.1-201ENST00000425889 474 ntBASIC4.44□□□□□ -1.7
NACAE9PAV3 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.44□□□□□ -1.7
NACAE9PAV3 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.44□□□□□ -1.7
NACAE9PAV3 RN7SL326P-201ENST00000477493 296 ntBASIC4.44□□□□□ -1.7
NACAE9PAV3 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.44□□□□□ -1.7
NACAE9PAV3 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC4.44□□□□□ -1.7
NACAE9PAV3 AC090568.1-201ENST00000509499 856 ntBASIC4.44□□□□□ -1.7
NACAE9PAV3 HSD3BP3-201ENST00000514706 994 ntBASIC4.44□□□□□ -1.7
NACAE9PAV3 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NACAE9PAV3 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC4.44□□□□□ -1.7
NACAE9PAV3 AP004609.2-201ENST00000532177 190 ntBASIC4.44□□□□□ -1.7
NACAE9PAV3 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
NACAE9PAV3 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.44□□□□□ -1.7
NACAE9PAV3 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC4.44□□□□□ -1.7
NACAE9PAV3 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC4.44□□□□□ -1.7
NACAE9PAV3 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NACAE9PAV3 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.44□□□□□ -1.7
NACAE9PAV3 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.44□□□□□ -1.7
NACAE9PAV3 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC4.44□□□□□ -1.7
NACAE9PAV3 AL138960.1-201ENST00000613838 513 ntBASIC4.44□□□□□ -1.7
NACAE9PAV3 uc_338.31-201ENST00000615595 186 ntBASIC4.44□□□□□ -1.7
NACAE9PAV3 SNX18P12-201ENST00000624821 759 ntBASIC4.44□□□□□ -1.7
NACAE9PAV3 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC4.44□□□□□ -1.7
NACAE9PAV3 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC4.44□□□□□ -1.7
NACAE9PAV3 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NACAE9PAV3 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NACAE9PAV3 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NACAE9PAV3 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
NACAE9PAV3 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NACAE9PAV3 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC4.43□□□□□ -1.7
NACAE9PAV3 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NACAE9PAV3 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC4.43□□□□□ -1.7
NACAE9PAV3 RN7SKP275-201ENST00000364626 301 ntBASIC4.43□□□□□ -1.7
NACAE9PAV3 RBBP4P5-201ENST00000398583 1266 ntBASIC4.43□□□□□ -1.7
NACAE9PAV3 AL096800.1-201ENST00000405326 893 ntBASIC4.43□□□□□ -1.7
NACAE9PAV3 AL139805.1-201ENST00000407837 289 ntBASIC4.43□□□□□ -1.7
NACAE9PAV3 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.43□□□□□ -1.7
NACAE9PAV3 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NACAE9PAV3 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC4.43□□□□□ -1.7
NACAE9PAV3 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC4.43□□□□□ -1.7
NACAE9PAV3 RPL12P11-201ENST00000439970 501 ntBASIC4.43□□□□□ -1.7
NACAE9PAV3 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC4.43□□□□□ -1.7
NACAE9PAV3 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC4.43□□□□□ -1.7
NACAE9PAV3 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.43□□□□□ -1.7
NACAE9PAV3 AP002453.1-201ENST00000492327 668 ntBASIC4.43□□□□□ -1.7
NACAE9PAV3 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NACAE9PAV3 ZNF519P4-201ENST00000514008 125 ntBASIC4.43□□□□□ -1.7
NACAE9PAV3 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC4.43□□□□□ -1.7
NACAE9PAV3 AC007066.2-202ENST00000566531 914 ntBASIC4.43□□□□□ -1.7
NACAE9PAV3 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC4.43□□□□□ -1.7
NACAE9PAV3 AL135999.3-201ENST00000610501 812 ntBASIC4.43□□□□□ -1.7
NACAE9PAV3 uc_338.26-201ENST00000612659 160 ntBASIC4.43□□□□□ -1.7
NACAE9PAV3 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC4.43□□□□□ -1.7
NACAE9PAV3 MIR6811-201ENST00000620409 58 ntBASIC4.43□□□□□ -1.7
NACAE9PAV3 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC4.43□□□□□ -1.7
NACAE9PAV3 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC4.43□□□□□ -1.7
NACAE9PAV3 OR7A1P-202ENST00000641542 1158 ntBASIC4.43□□□□□ -1.7
NACAE9PAV3 AC119674.1-217ENST00000641942 1086 ntBASIC4.43□□□□□ -1.7
NACAE9PAV3 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NACAE9PAV3 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NACAE9PAV3 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
NACAE9PAV3 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NACAE9PAV3 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
NACAE9PAV3 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NACAE9PAV3 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
NACAE9PAV3 SMG1P5-202ENST00000529428 4219 ntBASIC4.43□□□□□ -1.7
NACAE9PAV3 SMG1P2-201ENST00000566127 4221 ntBASIC4.43□□□□□ -1.7
NACAE9PAV3 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NACAE9PAV3 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
NACAE9PAV3 AP002512.4-202ENST00000641599 4530 ntBASIC4.43□□□□□ -1.7
NACAE9PAV3 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NACAE9PAV3 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NACAE9PAV3 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
NACAE9PAV3 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
NACAE9PAV3 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms