Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC8.68□□□□□ -1.02
HFM1A2PYH4 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC8.68□□□□□ -1.02
HFM1A2PYH4 FAM27E4-201ENST00000605259 342 ntBASIC8.68□□□□□ -1.02
HFM1A2PYH4 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC8.68□□□□□ -1.02
HFM1A2PYH4 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC8.68□□□□□ -1.02
HFM1A2PYH4 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC8.68□□□□□ -1.02
HFM1A2PYH4 AC007842.1-201ENST00000597336 2039 ntBASIC8.68□□□□□ -1.02
HFM1A2PYH4 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HFM1A2PYH4 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
HFM1A2PYH4 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC8.68□□□□□ -1.02
HFM1A2PYH4 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
HFM1A2PYH4 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC8.67□□□□□ -1.02
HFM1A2PYH4 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HFM1A2PYH4 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
HFM1A2PYH4 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HFM1A2PYH4 AL159987.1-201ENST00000347911 293 ntBASIC8.67□□□□□ -1.02
HFM1A2PYH4 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC8.67□□□□□ -1.02
HFM1A2PYH4 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC8.67□□□□□ -1.02
HFM1A2PYH4 DEFA9P-201ENST00000433042 285 ntBASIC8.67□□□□□ -1.02
HFM1A2PYH4 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC8.67□□□□□ -1.02
HFM1A2PYH4 MYO5BP2-201ENST00000449815 1277 ntBASIC8.67□□□□□ -1.02
HFM1A2PYH4 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC8.67□□□□□ -1.02
HFM1A2PYH4 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HFM1A2PYH4 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
HFM1A2PYH4 MRPS16P1-201ENST00000523462 412 ntBASIC8.67□□□□□ -1.02
HFM1A2PYH4 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HFM1A2PYH4 AC012213.2-201ENST00000562917 4597 ntBASIC8.67□□□□□ -1.02
HFM1A2PYH4 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HFM1A2PYH4 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HFM1A2PYH4 RN7SL787P-201ENST00000613000 284 ntBASIC8.67□□□□□ -1.02
HFM1A2PYH4 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
HFM1A2PYH4 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HFM1A2PYH4 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
HFM1A2PYH4 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC8.67□□□□□ -1.02
HFM1A2PYH4 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
HFM1A2PYH4 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC8.67□□□□□ -1.02
HFM1A2PYH4 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
HFM1A2PYH4 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
HFM1A2PYH4 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
HFM1A2PYH4 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HFM1A2PYH4 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
HFM1A2PYH4 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HFM1A2PYH4 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
HFM1A2PYH4 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HFM1A2PYH4 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HFM1A2PYH4 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC8.66□□□□□ -1.02
HFM1A2PYH4 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
HFM1A2PYH4 NENFP1-201ENST00000419476 466 ntBASIC8.66□□□□□ -1.02
HFM1A2PYH4 AL365220.1-201ENST00000432923 399 ntBASIC8.66□□□□□ -1.02
HFM1A2PYH4 USP24P1-201ENST00000433802 779 ntBASIC8.66□□□□□ -1.02
HFM1A2PYH4 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC8.66□□□□□ -1.02
HFM1A2PYH4 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC8.66□□□□□ -1.02
HFM1A2PYH4 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HFM1A2PYH4 AC138866.2-201ENST00000508650 584 ntBASIC8.66□□□□□ -1.02
HFM1A2PYH4 AC126615.2-201ENST00000553003 515 ntBASIC8.66□□□□□ -1.02
HFM1A2PYH4 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC8.66□□□□□ -1.02
HFM1A2PYH4 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC8.66□□□□□ -1.02
HFM1A2PYH4 AC087565.3-203ENST00000641018 837 ntBASIC8.66□□□□□ -1.02
HFM1A2PYH4 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HFM1A2PYH4 CCDC162P-202ENST00000368966 6751 ntBASIC8.66□□□□□ -1.02
HFM1A2PYH4 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC8.66□□□□□ -1.02
HFM1A2PYH4 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HFM1A2PYH4 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
HFM1A2PYH4 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HFM1A2PYH4 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC8.66□□□□□ -1.02
HFM1A2PYH4 AC005725.1-201ENST00000577346 2607 ntBASIC8.66□□□□□ -1.02
HFM1A2PYH4 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HFM1A2PYH4 ZNF101P1-201ENST00000435701 1720 ntBASIC8.66□□□□□ -1.02
HFM1A2PYH4 MFSD8-219ENST00000641228 2559 ntBASIC8.66□□□□□ -1.02
HFM1A2PYH4 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
HFM1A2PYH4 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
HFM1A2PYH4 MFSD8-239ENST00000641590 2479 ntBASIC8.66□□□□□ -1.02
HFM1A2PYH4 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HFM1A2PYH4 CPS1-IT1-201ENST00000628368 2306 ntBASIC8.66□□□□□ -1.02
HFM1A2PYH4 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
HFM1A2PYH4 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
HFM1A2PYH4 RNA5SP46-201ENST00000362370 120 ntBASIC8.65□□□□□ -1.02
HFM1A2PYH4 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC8.65□□□□□ -1.02
HFM1A2PYH4 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC8.65□□□□□ -1.02
HFM1A2PYH4 MIR2117-201ENST00000516780 80 ntBASIC8.65□□□□□ -1.02
HFM1A2PYH4 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC8.65□□□□□ -1.02
HFM1A2PYH4 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC8.65□□□□□ -1.02
HFM1A2PYH4 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC8.65□□□□□ -1.02
HFM1A2PYH4 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC8.65□□□□□ -1.02
HFM1A2PYH4 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC8.65□□□□□ -1.02
HFM1A2PYH4 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
HFM1A2PYH4 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
HFM1A2PYH4 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
HFM1A2PYH4 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
HFM1A2PYH4 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC8.65□□□□□ -1.02
HFM1A2PYH4 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.03
HFM1A2PYH4 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.03
HFM1A2PYH4 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
HFM1A2PYH4 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC8.65□□□□□ -1.03
HFM1A2PYH4 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC8.65□□□□□ -1.03
HFM1A2PYH4 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
HFM1A2PYH4 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
HFM1A2PYH4 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
HFM1A2PYH4 AL117378.2-201ENST00000622916 1337 ntBASIC8.64□□□□□ -1.03
HFM1A2PYH4 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms