Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 OR7A1P-202ENST00000641542 1158 ntBASIC4.59□□□□□ -1.67
HLA-DRB4X5D2U9 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
HLA-DRB4X5D2U9 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
HLA-DRB4X5D2U9 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
HLA-DRB4X5D2U9 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HLA-DRB4X5D2U9 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HLA-DRB4X5D2U9 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 AC005261.2-201ENST00000593427 4258 ntBASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 AL133243.2-201ENST00000610331 1621 ntBASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 UGT2B24P-201ENST00000514441 1597 ntBASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 RN7SKP151-201ENST00000410230 316 ntBASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 RPL7AP51-201ENST00000422016 760 ntBASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 RPS27AP6-201ENST00000427962 448 ntBASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 AC010086.1-201ENST00000437359 1052 ntBASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 RAB28P2-201ENST00000454299 641 ntBASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 AC112187.1-201ENST00000455837 479 ntBASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 AC044810.1-201ENST00000480271 711 ntBASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 RN7SL568P-201ENST00000493069 298 ntBASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 AC095052.1-201ENST00000509955 863 ntBASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 GUSBP9-201ENST00000510138 584 ntBASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 GTF2IP11-201ENST00000526931 420 ntBASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 AC020916.2-201ENST00000591242 360 ntBASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 AC011500.1-201ENST00000601963 469 ntBASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 AC008555.7-201ENST00000605008 583 ntBASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 RPSAP75-201ENST00000605848 301 ntBASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 AC069542.2-201ENST00000624816 216 ntBASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 AC099654.15-201ENST00000639802 509 ntBASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 AL034546.1-201ENST00000623740 3693 ntBASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DRB4X5D2U9 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 RN7SKP250-201ENST00000363924 321 ntBASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 FAM183DP-201ENST00000421987 399 ntBASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 RPSAP32-201ENST00000432681 526 ntBASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 RARRES2P3-201ENST00000457739 473 ntBASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 AC012123.2-201ENST00000485809 248 ntBASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 AC113367.2-201ENST00000505749 160 ntBASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 AC108103.1-201ENST00000511286 446 ntBASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 ZNF519P4-201ENST00000514008 125 ntBASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 CYP4F27P-201ENST00000514557 494 ntBASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 AP003033.2-201ENST00000528901 805 ntBASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 AL353684.1-201ENST00000622677 1120 ntBASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms