Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AL512652.1-201ENST00000619006 500 ntBASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 AC130360.2-201ENST00000533477 1556 ntBASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 AC137056.2-201ENST00000624055 1958 ntBASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 RNU1-134P-201ENST00000362935 165 ntBASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 RPS7P8-201ENST00000418311 581 ntBASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 NFYAP1-201ENST00000431953 972 ntBASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 AL731534.1-201ENST00000434711 269 ntBASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 AL355032.1-201ENST00000472981 438 ntBASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 AP002884.1-201ENST00000479691 655 ntBASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 AC007346.1-201ENST00000569208 867 ntBASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 MIR132-201ENST00000591554 101 ntBASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 AC073333.2-201ENST00000603589 769 ntBASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 AC022960.2-201ENST00000616300 666 ntBASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 MIR6071-201ENST00000616741 78 ntBASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 AP003400.2-201ENST00000624036 666 ntBASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.75□□□□□ -1.49
ATG4BQ9Y4P1 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 IFIT1P1-201ENST00000400497 1449 ntBASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 AP000432.2-201ENST00000624164 2048 ntBASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 AC016583.1-201ENST00000624221 2431 ntBASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 NME1P1-201ENST00000420914 382 ntBASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 AL355994.1-201ENST00000424379 260 ntBASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 AL445687.2-201ENST00000458156 728 ntBASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 AC114728.1-201ENST00000488289 483 ntBASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 PFN1P8-201ENST00000497012 543 ntBASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 AP001804.1-201ENST00000526868 919 ntBASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 AC005363.1-201ENST00000530779 351 ntBASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 AL645933.2-201ENST00000606743 1207 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms