Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 HLTF-208ENST00000494055 3633 ntAPPRIS P3 TSL 2 BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 PALLD-206ENST00000505667 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 RNU6-353P-201ENST00000364266 108 ntBASIC10.33□□□□□ -0.76
PHF8Q9UPP1 RPS3AP23-201ENST00000401762 784 ntBASIC10.33□□□□□ -0.76
PHF8Q9UPP1 GLRX3P2-201ENST00000405027 1038 ntBASIC10.33□□□□□ -0.76
PHF8Q9UPP1 LSM5-205ENST00000409952 687 ntTSL 4 BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 NRBF2P2-201ENST00000413087 861 ntBASIC10.33□□□□□ -0.76
PHF8Q9UPP1 AC004986.1-201ENST00000414855 607 ntBASIC10.33□□□□□ -0.76
PHF8Q9UPP1 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 MTCYBP6-201ENST00000441810 138 ntBASIC10.33□□□□□ -0.76
PHF8Q9UPP1 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 AL356121.1-201ENST00000442911 156 ntBASIC10.33□□□□□ -0.76
PHF8Q9UPP1 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 GOT2P2-201ENST00000450663 1251 ntBASIC10.33□□□□□ -0.76
PHF8Q9UPP1 PNPLA4P1-201ENST00000458328 305 ntBASIC10.33□□□□□ -0.76
PHF8Q9UPP1 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 PFN2-209ENST00000481275 560 ntTSL 4 BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 AC233724.1-201ENST00000503894 233 ntBASIC10.33□□□□□ -0.76
PHF8Q9UPP1 AC011352.3-201ENST00000505162 593 ntBASIC10.33□□□□□ -0.76
PHF8Q9UPP1 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 WDR45BP1-201ENST00000583470 1029 ntBASIC10.33□□□□□ -0.76
PHF8Q9UPP1 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 RNU6ATAC35P-201ENST00000609276 444 ntBASIC10.33□□□□□ -0.76
PHF8Q9UPP1 AC073488.8-201ENST00000631952 757 ntBASIC10.33□□□□□ -0.76
PHF8Q9UPP1 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 SEMA5A-201ENST00000382496 11762 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 AP005901.5-201ENST00000545779 1796 ntBASIC10.33□□□□□ -0.76
PHF8Q9UPP1 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 CACNB2-201ENST00000282343 3524 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 RBFOX1-203ENST00000355637 3321 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 SLC11A2-212ENST00000547688 2401 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 AC016831.3-201ENST00000446451 1723 ntBASIC10.33□□□□□ -0.76
PHF8Q9UPP1 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PHF8Q9UPP1 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
PHF8Q9UPP1 LMCD1-AS1-203ENST00000441861 2683 ntTSL 2 BASIC10.32□□□□□ -0.76
PHF8Q9UPP1 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PHF8Q9UPP1 SPATA31A6-201ENST00000332857 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PHF8Q9UPP1 GRIA2-201ENST00000264426 3445 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PHF8Q9UPP1 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
PHF8Q9UPP1 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC10.32□□□□□ -0.76
PHF8Q9UPP1 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC10.32□□□□□ -0.76
PHF8Q9UPP1 AL078621.1-201ENST00000272567 768 ntBASIC10.32□□□□□ -0.76
PHF8Q9UPP1 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PHF8Q9UPP1 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
PHF8Q9UPP1 OR2T6-201ENST00000355728 927 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
PHF8Q9UPP1 AC009413.1-201ENST00000414823 399 ntBASIC10.32□□□□□ -0.76
PHF8Q9UPP1 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC10.32□□□□□ -0.76
PHF8Q9UPP1 ELOCP14-201ENST00000428070 331 ntBASIC10.32□□□□□ -0.76
PHF8Q9UPP1 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC10.32□□□□□ -0.76
PHF8Q9UPP1 ELOCP7-201ENST00000439968 331 ntBASIC10.32□□□□□ -0.76
PHF8Q9UPP1 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC10.32□□□□□ -0.76
PHF8Q9UPP1 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC10.32□□□□□ -0.76
PHF8Q9UPP1 SEPHS1P4-201ENST00000446112 1176 ntBASIC10.32□□□□□ -0.76
PHF8Q9UPP1 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC10.32□□□□□ -0.76
PHF8Q9UPP1 ST13P21-201ENST00000453250 1098 ntBASIC10.32□□□□□ -0.76
PHF8Q9UPP1 RFC5P1-201ENST00000454419 874 ntBASIC10.32□□□□□ -0.76
PHF8Q9UPP1 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC10.32□□□□□ -0.76
PHF8Q9UPP1 RN7SL790P-201ENST00000474043 298 ntBASIC10.32□□□□□ -0.76
PHF8Q9UPP1 AC096576.1-201ENST00000489014 359 ntBASIC10.32□□□□□ -0.76
PHF8Q9UPP1 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC10.32□□□□□ -0.76
PHF8Q9UPP1 ACTR3BP4-201ENST00000503033 1244 ntBASIC10.32□□□□□ -0.76
PHF8Q9UPP1 PDLIM1P4-201ENST00000504327 1006 ntBASIC10.32□□□□□ -0.76
PHF8Q9UPP1 GAPDHP61-201ENST00000507324 1005 ntBASIC10.32□□□□□ -0.76
PHF8Q9UPP1 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC10.32□□□□□ -0.76
PHF8Q9UPP1 AP000662.1-201ENST00000530952 487 ntBASIC10.32□□□□□ -0.76
PHF8Q9UPP1 MYL6-211ENST00000548580 528 ntTSL 2 BASIC10.32□□□□□ -0.76
PHF8Q9UPP1 ARL2BPP2-201ENST00000550907 489 ntBASIC10.32□□□□□ -0.76
PHF8Q9UPP1 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC10.32□□□□□ -0.76
PHF8Q9UPP1 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PHF8Q9UPP1 AC099676.1-201ENST00000608886 657 ntBASIC10.32□□□□□ -0.76
PHF8Q9UPP1 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PHF8Q9UPP1 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC10.32□□□□□ -0.76
PHF8Q9UPP1 AL445264.1-201ENST00000621719 171 ntBASIC10.32□□□□□ -0.76
PHF8Q9UPP1 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC10.32□□□□□ -0.76
PHF8Q9UPP1 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC10.32□□□□□ -0.76
PHF8Q9UPP1 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PHF8Q9UPP1 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PHF8Q9UPP1 AC090983.1-201ENST00000623426 3897 ntBASIC10.32□□□□□ -0.76
PHF8Q9UPP1 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PHF8Q9UPP1 AC079298.1-201ENST00000625026 1619 ntBASIC10.32□□□□□ -0.76
PHF8Q9UPP1 ZNF3-207ENST00000424697 2718 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
PHF8Q9UPP1 AC093616.1-201ENST00000427434 2095 ntBASIC10.32□□□□□ -0.76
PHF8Q9UPP1 CD180-201ENST00000256447 5388 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PHF8Q9UPP1 AL161891.1-201ENST00000621575 4636 ntBASIC10.32□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms