Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 AC002519.2-203ENST00000567043 837 ntBASIC5.72□□□□□ -1.49
CCDC88CQ9P219 AC090651.1-201ENST00000567865 634 ntBASIC5.72□□□□□ -1.49
CCDC88CQ9P219 AC010547.6-201ENST00000571789 193 ntBASIC5.72□□□□□ -1.49
CCDC88CQ9P219 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 AL359091.1-201ENST00000449048 1734 ntBASIC5.72□□□□□ -1.49
CCDC88CQ9P219 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 ZNF969P-201ENST00000510345 2341 ntBASIC5.72□□□□□ -1.49
CCDC88CQ9P219 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 RNU1-150P-201ENST00000362491 162 ntBASIC5.72□□□□□ -1.49
CCDC88CQ9P219 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 H3F3BP1-201ENST00000440551 403 ntBASIC5.72□□□□□ -1.49
CCDC88CQ9P219 AL445665.1-202ENST00000452436 324 ntBASIC5.72□□□□□ -1.49
CCDC88CQ9P219 AC112187.1-201ENST00000455837 479 ntBASIC5.72□□□□□ -1.49
CCDC88CQ9P219 AC018638.3-201ENST00000461273 132 ntBASIC5.72□□□□□ -1.49
CCDC88CQ9P219 AC006530.1-201ENST00000555980 571 ntBASIC5.72□□□□□ -1.49
CCDC88CQ9P219 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 NPM1P45-201ENST00000583151 559 ntBASIC5.72□□□□□ -1.49
CCDC88CQ9P219 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 SNX18P3-202ENST00000565670 1750 ntBASIC5.72□□□□□ -1.49
CCDC88CQ9P219 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.49
CCDC88CQ9P219 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
CCDC88CQ9P219 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
CCDC88CQ9P219 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.49
CCDC88CQ9P219 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC88CQ9P219 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
CCDC88CQ9P219 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CCDC88CQ9P219 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC88CQ9P219 OR52B3P-201ENST00000314715 928 ntBASIC5.71□□□□□ -1.5
CCDC88CQ9P219 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC88CQ9P219 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC88CQ9P219 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC88CQ9P219 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC88CQ9P219 IGLV3-4-201ENST00000432300 244 ntBASIC5.71□□□□□ -1.5
CCDC88CQ9P219 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC88CQ9P219 AL645936.1-201ENST00000441979 518 ntBASIC5.71□□□□□ -1.5
CCDC88CQ9P219 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC88CQ9P219 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC88CQ9P219 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC88CQ9P219 RPS23P6-201ENST00000466136 431 ntBASIC5.71□□□□□ -1.5
CCDC88CQ9P219 RN7SL101P-201ENST00000496350 279 ntBASIC5.71□□□□□ -1.5
CCDC88CQ9P219 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC88CQ9P219 AC090958.1-201ENST00000511122 351 ntBASIC5.71□□□□□ -1.5
CCDC88CQ9P219 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.71□□□□□ -1.5
CCDC88CQ9P219 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC88CQ9P219 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.71□□□□□ -1.5
CCDC88CQ9P219 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.71□□□□□ -1.5
CCDC88CQ9P219 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC88CQ9P219 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC88CQ9P219 AC024651.2-201ENST00000562480 2098 ntBASIC5.71□□□□□ -1.5
CCDC88CQ9P219 PDZK1P1-202ENST00000425209 1350 ntBASIC5.71□□□□□ -1.5
CCDC88CQ9P219 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC88CQ9P219 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC88CQ9P219 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC88CQ9P219 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC88CQ9P219 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC88CQ9P219 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC88CQ9P219 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC88CQ9P219 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.7□□□□□ -1.5
CCDC88CQ9P219 AC116036.1-201ENST00000412199 367 ntBASIC5.7□□□□□ -1.5
CCDC88CQ9P219 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 RN7SKP248-201ENST00000516278 305 ntBASIC5.7□□□□□ -1.5
CCDC88CQ9P219 AC110056.1-201ENST00000525759 911 ntBASIC5.7□□□□□ -1.5
CCDC88CQ9P219 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 AC004890.3-201ENST00000605566 1095 ntBASIC5.7□□□□□ -1.5
CCDC88CQ9P219 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.7□□□□□ -1.5
CCDC88CQ9P219 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms