Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CCM2LQ9NUG4 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCM2LQ9NUG4 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 RNU6-1005P-201ENST00000384519 107 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 TAS2R15P-201ENST00000390674 928 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 RPL5P19-201ENST00000404228 893 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 AL592310.1-201ENST00000414330 671 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 XKRYP1-201ENST00000423438 492 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 MYO5BP3-201ENST00000431872 1279 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 XKRYP2-201ENST00000432915 492 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 RPL29P7-201ENST00000440227 457 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 MTCYBP12-201ENST00000440559 1134 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 AC064862.5-201ENST00000440618 334 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 ST13P21-201ENST00000453250 1098 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 MTCO2P6-201ENST00000463134 685 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 RN7SL152P-201ENST00000484176 298 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 AC026414.1-201ENST00000504046 698 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 RN7SKP34-201ENST00000516142 244 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 MTCYBP19-201ENST00000517463 1124 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 AL049830.4-201ENST00000555149 351 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 AC004232.1-201ENST00000571388 208 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 RN7SL199P-201ENST00000578752 281 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 RN7SL656P-201ENST00000579044 281 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 FAM106CP-201ENST00000582212 507 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 RN7SL404P-201ENST00000582421 281 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 MIR4470-201ENST00000583453 72 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 COX6CP16-201ENST00000603667 216 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 AL450336.1-201ENST00000605180 586 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 AC019131.2-201ENST00000609071 870 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 AL159169.2-201ENST00000610061 1269 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 AL354718.1-201ENST00000619764 589 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 AC012629.3-201ENST00000623397 328 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 AL596275.2-207ENST00000641188 675 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 AC006511.3-201ENST00000624929 1783 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 EEF1A1P20-201ENST00000514852 1386 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 CCDC150P1-201ENST00000537123 2215 ntBASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCM2LQ9NUG4 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCM2LQ9NUG4 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCM2LQ9NUG4 AC007012.2-201ENST00000623206 1676 ntBASIC6.43□□□□□ -1.38
CCM2LQ9NUG4 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCM2LQ9NUG4 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCM2LQ9NUG4 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
CCM2LQ9NUG4 AL356361.1-201ENST00000400943 1459 ntBASIC6.43□□□□□ -1.38
CCM2LQ9NUG4 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCM2LQ9NUG4 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCM2LQ9NUG4 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCM2LQ9NUG4 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CCM2LQ9NUG4 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCM2LQ9NUG4 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.43□□□□□ -1.38
CCM2LQ9NUG4 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CCM2LQ9NUG4 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CCM2LQ9NUG4 ATF1P1-201ENST00000406040 927 ntBASIC6.43□□□□□ -1.38
CCM2LQ9NUG4 RNA5SP251-201ENST00000410614 137 ntBASIC6.43□□□□□ -1.38
CCM2LQ9NUG4 LIPT1P1-201ENST00000415870 1186 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms