Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.31□□□□□ -1.4
SIX2Q9NPC8 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.31□□□□□ -1.4
SIX2Q9NPC8 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.31□□□□□ -1.4
SIX2Q9NPC8 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.31□□□□□ -1.4
SIX2Q9NPC8 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SIX2Q9NPC8 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.31□□□□□ -1.4
SIX2Q9NPC8 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.31□□□□□ -1.4
SIX2Q9NPC8 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.31□□□□□ -1.4
SIX2Q9NPC8 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.31□□□□□ -1.4
SIX2Q9NPC8 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.31□□□□□ -1.4
SIX2Q9NPC8 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SIX2Q9NPC8 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.31□□□□□ -1.4
SIX2Q9NPC8 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SIX2Q9NPC8 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SIX2Q9NPC8 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SIX2Q9NPC8 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
SIX2Q9NPC8 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SIX2Q9NPC8 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SIX2Q9NPC8 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SIX2Q9NPC8 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.3□□□□□ -1.4
SIX2Q9NPC8 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SIX2Q9NPC8 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.3□□□□□ -1.4
SIX2Q9NPC8 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SIX2Q9NPC8 AC104966.1-201ENST00000467010 1464 ntBASIC6.3□□□□□ -1.4
SIX2Q9NPC8 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
SIX2Q9NPC8 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.3□□□□□ -1.4
SIX2Q9NPC8 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.3□□□□□ -1.4
SIX2Q9NPC8 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SIX2Q9NPC8 RNA5SP431-201ENST00000410312 120 ntBASIC6.3□□□□□ -1.4
SIX2Q9NPC8 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.3□□□□□ -1.4
SIX2Q9NPC8 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.3□□□□□ -1.4
SIX2Q9NPC8 EEF1B2P3-201ENST00000447718 678 ntBASIC6.3□□□□□ -1.4
SIX2Q9NPC8 AC068491.1-201ENST00000449539 1241 ntBASIC6.3□□□□□ -1.4
SIX2Q9NPC8 AC093166.4-201ENST00000457867 318 ntBASIC6.3□□□□□ -1.4
SIX2Q9NPC8 PRMT5P1-201ENST00000514351 598 ntBASIC6.3□□□□□ -1.4
SIX2Q9NPC8 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.3□□□□□ -1.4
SIX2Q9NPC8 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.3□□□□□ -1.4
SIX2Q9NPC8 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.3□□□□□ -1.4
SIX2Q9NPC8 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.3□□□□□ -1.4
SIX2Q9NPC8 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.3□□□□□ -1.4
SIX2Q9NPC8 AL513327.3-201ENST00000602618 469 ntBASIC6.3□□□□□ -1.4
SIX2Q9NPC8 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.3□□□□□ -1.4
SIX2Q9NPC8 AL136131.3-201ENST00000607600 188 ntBASIC6.3□□□□□ -1.4
SIX2Q9NPC8 AP001437.1-201ENST00000608783 456 ntBASIC6.3□□□□□ -1.4
SIX2Q9NPC8 AL359091.2-201ENST00000609303 556 ntBASIC6.3□□□□□ -1.4
SIX2Q9NPC8 MIR6889-201ENST00000613185 59 ntBASIC6.3□□□□□ -1.4
SIX2Q9NPC8 AL683826.1-201ENST00000624104 627 ntBASIC6.3□□□□□ -1.4
SIX2Q9NPC8 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SIX2Q9NPC8 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.3□□□□□ -1.4
SIX2Q9NPC8 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SIX2Q9NPC8 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
SIX2Q9NPC8 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.3□□□□□ -1.4
SIX2Q9NPC8 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.3□□□□□ -1.4
SIX2Q9NPC8 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SIX2Q9NPC8 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SIX2Q9NPC8 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.3□□□□□ -1.4
SIX2Q9NPC8 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SIX2Q9NPC8 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SIX2Q9NPC8 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SIX2Q9NPC8 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SIX2Q9NPC8 MSL3P1-202ENST00000440028 1468 ntBASIC6.29□□□□□ -1.4
SIX2Q9NPC8 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.29□□□□□ -1.4
SIX2Q9NPC8 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SIX2Q9NPC8 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.29□□□□□ -1.4
SIX2Q9NPC8 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SIX2Q9NPC8 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SIX2Q9NPC8 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SIX2Q9NPC8 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SIX2Q9NPC8 RNA5SP500-201ENST00000364486 119 ntBASIC6.29□□□□□ -1.4
SIX2Q9NPC8 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.29□□□□□ -1.4
SIX2Q9NPC8 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.29□□□□□ -1.4
SIX2Q9NPC8 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC6.29□□□□□ -1.4
SIX2Q9NPC8 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.29□□□□□ -1.4
SIX2Q9NPC8 RN7SL193P-201ENST00000491708 276 ntBASIC6.29□□□□□ -1.4
SIX2Q9NPC8 AC090058.1-201ENST00000498788 435 ntBASIC6.29□□□□□ -1.4
SIX2Q9NPC8 RBBP4P1-201ENST00000502424 1276 ntBASIC6.29□□□□□ -1.4
SIX2Q9NPC8 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.29□□□□□ -1.4
SIX2Q9NPC8 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.29□□□□□ -1.4
SIX2Q9NPC8 IGKV2-19-201ENST00000518132 283 ntBASIC6.29□□□□□ -1.4
SIX2Q9NPC8 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.29□□□□□ -1.4
SIX2Q9NPC8 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SIX2Q9NPC8 AC084121.1-201ENST00000533882 835 ntBASIC6.29□□□□□ -1.4
SIX2Q9NPC8 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.29□□□□□ -1.4
SIX2Q9NPC8 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.29□□□□□ -1.4
SIX2Q9NPC8 RPA2P1-201ENST00000556557 721 ntBASIC6.29□□□□□ -1.4
SIX2Q9NPC8 AL163952.1-202ENST00000569625 600 ntBASIC6.29□□□□□ -1.4
SIX2Q9NPC8 MIR3154-201ENST00000577829 84 ntBASIC6.29□□□□□ -1.4
SIX2Q9NPC8 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.29□□□□□ -1.4
SIX2Q9NPC8 AC025857.2-201ENST00000602711 238 ntBASIC6.29□□□□□ -1.4
SIX2Q9NPC8 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SIX2Q9NPC8 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.29□□□□□ -1.4
SIX2Q9NPC8 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
SIX2Q9NPC8 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
SIX2Q9NPC8 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SIX2Q9NPC8 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.29□□□□□ -1.4
SIX2Q9NPC8 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SIX2Q9NPC8 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SIX2Q9NPC8 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
SIX2Q9NPC8 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SIX2Q9NPC8 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms