Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NXF3Q9H4D5 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NXF3Q9H4D5 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
NXF3Q9H4D5 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NXF3Q9H4D5 RN7SKP81-201ENST00000365603 331 ntBASIC6.47□□□□□ -1.37
NXF3Q9H4D5 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
NXF3Q9H4D5 AC087752.1-201ENST00000391360 558 ntBASIC6.47□□□□□ -1.37
NXF3Q9H4D5 AC016739.1-201ENST00000405359 345 ntBASIC6.47□□□□□ -1.37
NXF3Q9H4D5 AL512422.1-201ENST00000407033 553 ntBASIC6.47□□□□□ -1.37
NXF3Q9H4D5 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.47□□□□□ -1.37
NXF3Q9H4D5 AL353626.3-201ENST00000413399 657 ntBASIC6.47□□□□□ -1.37
NXF3Q9H4D5 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.47□□□□□ -1.37
NXF3Q9H4D5 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.47□□□□□ -1.37
NXF3Q9H4D5 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.47□□□□□ -1.37
NXF3Q9H4D5 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.47□□□□□ -1.37
NXF3Q9H4D5 AL161636.2-201ENST00000445179 927 ntBASIC6.47□□□□□ -1.37
NXF3Q9H4D5 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.47□□□□□ -1.37
NXF3Q9H4D5 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.47□□□□□ -1.37
NXF3Q9H4D5 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.47□□□□□ -1.37
NXF3Q9H4D5 SDC4P-201ENST00000453285 601 ntBASIC6.47□□□□□ -1.37
NXF3Q9H4D5 NXT1P1-201ENST00000458481 316 ntBASIC6.47□□□□□ -1.37
NXF3Q9H4D5 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.47□□□□□ -1.37
NXF3Q9H4D5 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.47□□□□□ -1.37
NXF3Q9H4D5 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.47□□□□□ -1.37
NXF3Q9H4D5 AC079600.1-201ENST00000550326 297 ntBASIC6.47□□□□□ -1.37
NXF3Q9H4D5 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.47□□□□□ -1.37
NXF3Q9H4D5 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.47□□□□□ -1.37
NXF3Q9H4D5 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.47□□□□□ -1.37
NXF3Q9H4D5 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.47□□□□□ -1.37
NXF3Q9H4D5 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
NXF3Q9H4D5 PRELID3BP3-201ENST00000584963 545 ntBASIC6.47□□□□□ -1.37
NXF3Q9H4D5 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.47□□□□□ -1.37
NXF3Q9H4D5 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.47□□□□□ -1.37
NXF3Q9H4D5 AL357153.4-201ENST00000620487 1016 ntBASIC6.47□□□□□ -1.37
NXF3Q9H4D5 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NXF3Q9H4D5 AL121768.1-201ENST00000613917 2544 ntBASIC6.47□□□□□ -1.37
NXF3Q9H4D5 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
NXF3Q9H4D5 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.47□□□□□ -1.37
NXF3Q9H4D5 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.47□□□□□ -1.37
NXF3Q9H4D5 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NXF3Q9H4D5 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
NXF3Q9H4D5 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
NXF3Q9H4D5 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NXF3Q9H4D5 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
NXF3Q9H4D5 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.46□□□□□ -1.37
NXF3Q9H4D5 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
NXF3Q9H4D5 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.37
NXF3Q9H4D5 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.46□□□□□ -1.37
NXF3Q9H4D5 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NXF3Q9H4D5 FUNDC2P3-201ENST00000334716 533 ntBASIC6.46□□□□□ -1.38
NXF3Q9H4D5 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
NXF3Q9H4D5 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
NXF3Q9H4D5 EEF1B2P8-201ENST00000414101 671 ntBASIC6.46□□□□□ -1.38
NXF3Q9H4D5 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.46□□□□□ -1.38
NXF3Q9H4D5 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.46□□□□□ -1.38
NXF3Q9H4D5 AC079922.1-201ENST00000443291 359 ntBASIC6.46□□□□□ -1.38
NXF3Q9H4D5 RPL36AP39-201ENST00000445859 318 ntBASIC6.46□□□□□ -1.38
NXF3Q9H4D5 AC093166.4-201ENST00000457867 318 ntBASIC6.46□□□□□ -1.38
NXF3Q9H4D5 RN7SL174P-201ENST00000475578 289 ntBASIC6.46□□□□□ -1.38
NXF3Q9H4D5 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.46□□□□□ -1.38
NXF3Q9H4D5 RN7SL57P-201ENST00000493687 290 ntBASIC6.46□□□□□ -1.38
NXF3Q9H4D5 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.46□□□□□ -1.38
NXF3Q9H4D5 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.46□□□□□ -1.38
NXF3Q9H4D5 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.46□□□□□ -1.38
NXF3Q9H4D5 AC135626.1-201ENST00000556983 435 ntBASIC6.46□□□□□ -1.38
NXF3Q9H4D5 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.46□□□□□ -1.38
NXF3Q9H4D5 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.46□□□□□ -1.38
NXF3Q9H4D5 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NXF3Q9H4D5 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NXF3Q9H4D5 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.46□□□□□ -1.38
NXF3Q9H4D5 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.46□□□□□ -1.38
NXF3Q9H4D5 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NXF3Q9H4D5 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NXF3Q9H4D5 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.46□□□□□ -1.38
NXF3Q9H4D5 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
NXF3Q9H4D5 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.46□□□□□ -1.38
NXF3Q9H4D5 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
NXF3Q9H4D5 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NXF3Q9H4D5 ABCA11P-202ENST00000504019 2110 ntBASIC6.46□□□□□ -1.38
NXF3Q9H4D5 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
NXF3Q9H4D5 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.46□□□□□ -1.38
NXF3Q9H4D5 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.45□□□□□ -1.38
NXF3Q9H4D5 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
NXF3Q9H4D5 PDZK1P1-202ENST00000425209 1350 ntBASIC6.45□□□□□ -1.38
NXF3Q9H4D5 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
NXF3Q9H4D5 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NXF3Q9H4D5 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.45□□□□□ -1.38
NXF3Q9H4D5 AL662795.2-201ENST00000624252 3706 ntBASIC6.45□□□□□ -1.38
NXF3Q9H4D5 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
NXF3Q9H4D5 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
NXF3Q9H4D5 AC106872.5-201ENST00000508856 1416 ntBASIC6.45□□□□□ -1.38
NXF3Q9H4D5 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NXF3Q9H4D5 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NXF3Q9H4D5 AC006511.3-201ENST00000624929 1783 ntBASIC6.45□□□□□ -1.38
NXF3Q9H4D5 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.45□□□□□ -1.38
NXF3Q9H4D5 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
NXF3Q9H4D5 RN7SKP151-201ENST00000410230 316 ntBASIC6.45□□□□□ -1.38
NXF3Q9H4D5 RN7SKP166-201ENST00000410812 305 ntBASIC6.45□□□□□ -1.38
NXF3Q9H4D5 TMA16P2-201ENST00000413187 601 ntBASIC6.45□□□□□ -1.38
NXF3Q9H4D5 CHEK2P5-201ENST00000423877 246 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms