Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.23□□□□□ -1.41
TRIM4Q9C037 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM4Q9C037 LYPLA1P3-201ENST00000402650 695 ntBASIC6.23□□□□□ -1.41
TRIM4Q9C037 RN7SKP296-201ENST00000411185 341 ntBASIC6.23□□□□□ -1.41
TRIM4Q9C037 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM4Q9C037 RPS7P12-201ENST00000422385 582 ntBASIC6.23□□□□□ -1.41
TRIM4Q9C037 AL139415.1-201ENST00000424862 352 ntBASIC6.23□□□□□ -1.41
TRIM4Q9C037 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.23□□□□□ -1.41
TRIM4Q9C037 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.23□□□□□ -1.41
TRIM4Q9C037 GAPDHP75-201ENST00000433910 943 ntBASIC6.23□□□□□ -1.41
TRIM4Q9C037 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.23□□□□□ -1.41
TRIM4Q9C037 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM4Q9C037 AC073109.1-201ENST00000445066 978 ntBASIC6.23□□□□□ -1.41
TRIM4Q9C037 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM4Q9C037 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM4Q9C037 RPL7AP23-201ENST00000482625 776 ntBASIC6.23□□□□□ -1.41
TRIM4Q9C037 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM4Q9C037 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM4Q9C037 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC6.23□□□□□ -1.41
TRIM4Q9C037 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.23□□□□□ -1.41
TRIM4Q9C037 AC091849.1-201ENST00000509920 121 ntBASIC6.23□□□□□ -1.41
TRIM4Q9C037 AC006499.4-201ENST00000510947 694 ntBASIC6.23□□□□□ -1.41
TRIM4Q9C037 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM4Q9C037 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
TRIM4Q9C037 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM4Q9C037 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM4Q9C037 TXNP4-201ENST00000575018 310 ntBASIC6.23□□□□□ -1.41
TRIM4Q9C037 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM4Q9C037 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM4Q9C037 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM4Q9C037 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.23□□□□□ -1.41
TRIM4Q9C037 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM4Q9C037 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
TRIM4Q9C037 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
TRIM4Q9C037 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
TRIM4Q9C037 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
TRIM4Q9C037 AL353763.1-201ENST00000624467 1628 ntBASIC6.23□□□□□ -1.41
TRIM4Q9C037 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM4Q9C037 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM4Q9C037 AC053481.2-202ENST00000582394 1500 ntBASIC6.23□□□□□ -1.41
TRIM4Q9C037 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM4Q9C037 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM4Q9C037 CASC19-228ENST00000641414 1684 ntBASIC6.23□□□□□ -1.41
TRIM4Q9C037 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM4Q9C037 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM4Q9C037 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.22□□□□□ -1.41
TRIM4Q9C037 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
TRIM4Q9C037 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.22□□□□□ -1.41
TRIM4Q9C037 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM4Q9C037 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM4Q9C037 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.22□□□□□ -1.41
TRIM4Q9C037 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM4Q9C037 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
TRIM4Q9C037 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
TRIM4Q9C037 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM4Q9C037 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM4Q9C037 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
TRIM4Q9C037 RPL11P4-201ENST00000332269 436 ntBASIC6.22□□□□□ -1.41
TRIM4Q9C037 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
TRIM4Q9C037 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM4Q9C037 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
TRIM4Q9C037 SNORA17A-201ENST00000391185 133 ntBASIC6.22□□□□□ -1.41
TRIM4Q9C037 UBBP1-201ENST00000392399 473 ntBASIC6.22□□□□□ -1.41
TRIM4Q9C037 AL031985.1-201ENST00000392713 418 ntBASIC6.22□□□□□ -1.41
TRIM4Q9C037 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM4Q9C037 HMGN1P20-201ENST00000411849 300 ntBASIC6.22□□□□□ -1.41
TRIM4Q9C037 HMGA1P8-201ENST00000414130 321 ntBASIC6.22□□□□□ -1.41
TRIM4Q9C037 GTF3AP1-201ENST00000416942 1004 ntBASIC6.22□□□□□ -1.41
TRIM4Q9C037 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM4Q9C037 AL360013.1-201ENST00000419031 858 ntBASIC6.22□□□□□ -1.41
TRIM4Q9C037 AC099782.1-201ENST00000425889 474 ntBASIC6.22□□□□□ -1.41
TRIM4Q9C037 AC097721.1-201ENST00000427150 1253 ntBASIC6.22□□□□□ -1.41
TRIM4Q9C037 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.22□□□□□ -1.41
TRIM4Q9C037 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.22□□□□□ -1.41
TRIM4Q9C037 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM4Q9C037 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM4Q9C037 NPM1P27-201ENST00000502784 830 ntBASIC6.22□□□□□ -1.41
TRIM4Q9C037 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.22□□□□□ -1.41
TRIM4Q9C037 AC135983.3-201ENST00000528049 1226 ntBASIC6.22□□□□□ -1.41
TRIM4Q9C037 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM4Q9C037 AL121579.2-201ENST00000555466 590 ntBASIC6.22□□□□□ -1.41
TRIM4Q9C037 AC019322.1-201ENST00000571869 389 ntBASIC6.22□□□□□ -1.41
TRIM4Q9C037 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.22□□□□□ -1.41
TRIM4Q9C037 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.22□□□□□ -1.41
TRIM4Q9C037 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM4Q9C037 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.22□□□□□ -1.41
TRIM4Q9C037 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.22□□□□□ -1.41
TRIM4Q9C037 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
TRIM4Q9C037 AC245052.7-201ENST00000601161 359 ntBASIC6.22□□□□□ -1.41
TRIM4Q9C037 AL356986.1-201ENST00000604085 341 ntBASIC6.22□□□□□ -1.41
TRIM4Q9C037 AL136295.6-201ENST00000610486 658 ntBASIC6.22□□□□□ -1.41
TRIM4Q9C037 MIR6768-201ENST00000610734 72 ntBASIC6.22□□□□□ -1.41
TRIM4Q9C037 MIR6826-201ENST00000617808 98 ntBASIC6.22□□□□□ -1.41
TRIM4Q9C037 AC005277.2-201ENST00000617898 390 ntBASIC6.22□□□□□ -1.41
TRIM4Q9C037 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM4Q9C037 RAB28P4-201ENST00000622233 665 ntBASIC6.22□□□□□ -1.41
TRIM4Q9C037 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
TRIM4Q9C037 SNORA17.5-201ENST00000630429 132 ntBASIC6.22□□□□□ -1.41
TRIM4Q9C037 AC073488.9-201ENST00000631601 754 ntBASIC6.22□□□□□ -1.41
TRIM4Q9C037 OR7A1P-202ENST00000641542 1158 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms