Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 TRIM60P17-201ENST00000415181 719 ntBASIC5.92□□□□□ -1.46
VPS33AQ96AX1 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS33AQ96AX1 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.92□□□□□ -1.46
VPS33AQ96AX1 AJ239321.1-201ENST00000424255 564 ntBASIC5.92□□□□□ -1.46
VPS33AQ96AX1 RPL12P16-201ENST00000431098 498 ntBASIC5.92□□□□□ -1.46
VPS33AQ96AX1 AL731534.1-201ENST00000434711 269 ntBASIC5.92□□□□□ -1.46
VPS33AQ96AX1 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.92□□□□□ -1.46
VPS33AQ96AX1 RNU6-319P-201ENST00000516025 108 ntBASIC5.92□□□□□ -1.46
VPS33AQ96AX1 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.92□□□□□ -1.46
VPS33AQ96AX1 AC103855.4-201ENST00000533158 265 ntBASIC5.92□□□□□ -1.46
VPS33AQ96AX1 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.92□□□□□ -1.46
VPS33AQ96AX1 RPL3P13-201ENST00000550415 216 ntBASIC5.92□□□□□ -1.46
VPS33AQ96AX1 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.92□□□□□ -1.46
VPS33AQ96AX1 AC027281.1-201ENST00000574178 758 ntBASIC5.92□□□□□ -1.46
VPS33AQ96AX1 AC006120.1-201ENST00000579375 546 ntBASIC5.92□□□□□ -1.46
VPS33AQ96AX1 RN7SL32P-201ENST00000580514 281 ntBASIC5.92□□□□□ -1.46
VPS33AQ96AX1 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.92□□□□□ -1.46
VPS33AQ96AX1 AC090241.1-201ENST00000587732 621 ntBASIC5.92□□□□□ -1.46
VPS33AQ96AX1 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.92□□□□□ -1.46
VPS33AQ96AX1 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.92□□□□□ -1.46
VPS33AQ96AX1 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VPS33AQ96AX1 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.92□□□□□ -1.46
VPS33AQ96AX1 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS33AQ96AX1 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
VPS33AQ96AX1 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
VPS33AQ96AX1 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.92□□□□□ -1.46
VPS33AQ96AX1 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
VPS33AQ96AX1 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS33AQ96AX1 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.92□□□□□ -1.46
VPS33AQ96AX1 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 AC004023.1-201ENST00000561473 1744 ntBASIC5.91□□□□□ -1.46
VPS33AQ96AX1 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 MORF4-201ENST00000447135 971 ntBASIC5.91□□□□□ -1.46
VPS33AQ96AX1 AC009244.1-201ENST00000450566 258 ntBASIC5.91□□□□□ -1.46
VPS33AQ96AX1 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 AL354872.1-201ENST00000456361 967 ntBASIC5.91□□□□□ -1.46
VPS33AQ96AX1 MTND6P32-201ENST00000457611 483 ntBASIC5.91□□□□□ -1.46
VPS33AQ96AX1 RN7SL350P-201ENST00000492591 299 ntBASIC5.91□□□□□ -1.46
VPS33AQ96AX1 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 RNA5SP418-201ENST00000515951 117 ntBASIC5.91□□□□□ -1.46
VPS33AQ96AX1 OR6M2P-201ENST00000529831 871 ntBASIC5.91□□□□□ -1.46
VPS33AQ96AX1 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 AC089984.3-201ENST00000552838 363 ntBASIC5.91□□□□□ -1.46
VPS33AQ96AX1 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 OR4C49P-201ENST00000563891 900 ntBASIC5.91□□□□□ -1.46
VPS33AQ96AX1 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 RNU4ATAC-201ENST00000580972 127 ntBASIC5.91□□□□□ -1.46
VPS33AQ96AX1 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS33AQ96AX1 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
VPS33AQ96AX1 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
VPS33AQ96AX1 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VPS33AQ96AX1 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS33AQ96AX1 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS33AQ96AX1 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VPS33AQ96AX1 SNORA43.1-201ENST00000364863 140 ntBASIC5.9□□□□□ -1.46
VPS33AQ96AX1 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
VPS33AQ96AX1 AL121977.1-201ENST00000401636 979 ntBASIC5.9□□□□□ -1.46
VPS33AQ96AX1 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS33AQ96AX1 DPPA2P2-201ENST00000418220 897 ntBASIC5.9□□□□□ -1.46
VPS33AQ96AX1 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS33AQ96AX1 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.9□□□□□ -1.46
VPS33AQ96AX1 AC006509.1-201ENST00000420788 634 ntBASIC5.9□□□□□ -1.46
VPS33AQ96AX1 RPS7P14-201ENST00000426405 583 ntBASIC5.9□□□□□ -1.46
VPS33AQ96AX1 RPS10P14-201ENST00000440748 502 ntBASIC5.9□□□□□ -1.46
VPS33AQ96AX1 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.9□□□□□ -1.46
VPS33AQ96AX1 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VPS33AQ96AX1 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS33AQ96AX1 AC108751.3-201ENST00000461814 1020 ntBASIC5.9□□□□□ -1.46
VPS33AQ96AX1 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS33AQ96AX1 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms