Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 NCOA4P3-201ENST00000513203 1877 ntBASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 BX005019.1-201ENST00000561881 1810 ntBASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 AC095038.1-201ENST00000429248 1591 ntBASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 CDK8P2-201ENST00000415020 547 ntBASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 NUP35P2-201ENST00000416748 943 ntBASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 AL392003.1-201ENST00000434394 243 ntBASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 EPS15P1-201ENST00000448836 336 ntBASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 KF459542.1-201ENST00000450908 553 ntBASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 AL603882.1-201ENST00000463059 681 ntBASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 AP002371.1-201ENST00000463604 433 ntBASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 RPL6P9-201ENST00000466502 859 ntBASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 BZW1P2-201ENST00000473537 826 ntBASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 NREP-223ENST00000515855 801 ntTSL 4 BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 SCARNA6-201ENST00000515982 265 ntBASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 RGS5-220ENST00000528689 566 ntTSL 5 BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 ANP32BP3-201ENST00000559213 706 ntBASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 AC136619.2-201ENST00000563361 631 ntBASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 AC023813.2-201ENST00000564321 469 ntBASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 AC138207.8-204ENST00000579588 527 ntBASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 AC107993.1-201ENST00000591343 684 ntBASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 AC011447.2-201ENST00000592921 283 ntBASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 AC092653.1-201ENST00000608509 531 ntBASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 AC072039.2-201ENST00000608883 439 ntBASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 AL137000.1-201ENST00000610528 1244 ntBASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 AL590410.1-201ENST00000617925 333 ntBASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 AC091544.5-201ENST00000620192 3815 ntBASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 Y_RNA.248-201ENST00000364501 109 ntBASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 Y_RNA.813-201ENST00000364639 102 ntBASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 RNA5SP152-201ENST00000365184 110 ntBASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 AC008171.1-201ENST00000395058 200 ntBASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 AK4P4-201ENST00000419465 646 ntBASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 PTPN2P1-201ENST00000423212 1072 ntBASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 UQCRHP1-204ENST00000424609 274 ntBASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 AL596276.1-201ENST00000434465 418 ntBASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 PTENP1-201ENST00000447117 1215 ntBASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 VN1R34P-201ENST00000447387 883 ntBASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 GAPDHP16-201ENST00000448152 962 ntBASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 MTND2P24-201ENST00000453434 806 ntBASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 MRPL35P4-201ENST00000453682 566 ntBASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 RPL7P45-201ENST00000455851 743 ntBASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 RN7SL797P-201ENST00000486314 297 ntBASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 RPL5P33-201ENST00000487833 905 ntBASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 RPS12P31-201ENST00000491419 398 ntBASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 OR9N1P-202ENST00000494289 481 ntBASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 GAPDHP71-201ENST00000511530 1003 ntBASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 RNU6-491P-201ENST00000516099 110 ntBASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 RN7SKP34-201ENST00000516142 244 ntBASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC7.38□□□□□ -1.23
SHKBP1Q8TBC3 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms