Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC9.12□□□□□ -0.95
VPS8Q8N3P4 AL390879.1-201ENST00000439143 386 ntBASIC9.12□□□□□ -0.95
VPS8Q8N3P4 OR7E116P-201ENST00000448529 957 ntBASIC9.12□□□□□ -0.95
VPS8Q8N3P4 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC9.12□□□□□ -0.95
VPS8Q8N3P4 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC9.12□□□□□ -0.95
VPS8Q8N3P4 MRO-208ENST00000588444 866 ntTSL 3 BASIC9.12□□□□□ -0.95
VPS8Q8N3P4 AL352984.2-201ENST00000611153 546 ntBASIC9.12□□□□□ -0.95
VPS8Q8N3P4 AL034408.1-201ENST00000637712 664 ntBASIC9.12□□□□□ -0.95
VPS8Q8N3P4 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS8Q8N3P4 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VPS8Q8N3P4 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VPS8Q8N3P4 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
VPS8Q8N3P4 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC9.11□□□□□ -0.95
VPS8Q8N3P4 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VPS8Q8N3P4 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
VPS8Q8N3P4 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VPS8Q8N3P4 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
VPS8Q8N3P4 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC9.11□□□□□ -0.95
VPS8Q8N3P4 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
VPS8Q8N3P4 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VPS8Q8N3P4 RNA5SP46-201ENST00000362370 120 ntBASIC9.11□□□□□ -0.95
VPS8Q8N3P4 SNORD1C-201ENST00000363315 78 ntBASIC9.11□□□□□ -0.95
VPS8Q8N3P4 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
VPS8Q8N3P4 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC9.11□□□□□ -0.95
VPS8Q8N3P4 AC019205.1-201ENST00000421830 730 ntBASIC9.11□□□□□ -0.95
VPS8Q8N3P4 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC9.11□□□□□ -0.95
VPS8Q8N3P4 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC9.11□□□□□ -0.95
VPS8Q8N3P4 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC9.11□□□□□ -0.95
VPS8Q8N3P4 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC9.11□□□□□ -0.95
VPS8Q8N3P4 MYL6-213ENST00000549017 502 ntTSL 3 BASIC9.11□□□□□ -0.95
VPS8Q8N3P4 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC9.11□□□□□ -0.95
VPS8Q8N3P4 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC9.11□□□□□ -0.95
VPS8Q8N3P4 AC018659.2-201ENST00000624690 715 ntBASIC9.11□□□□□ -0.95
VPS8Q8N3P4 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC9.11□□□□□ -0.95
VPS8Q8N3P4 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VPS8Q8N3P4 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS8Q8N3P4 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS8Q8N3P4 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS8Q8N3P4 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC9.1□□□□□ -0.95
VPS8Q8N3P4 DMD-222ENST00000474231 5209 ntTSL 5 BASIC9.1□□□□□ -0.95
VPS8Q8N3P4 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
VPS8Q8N3P4 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VPS8Q8N3P4 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS8Q8N3P4 NBPF8-201ENST00000583271 5330 ntBASIC9.1□□□□□ -0.95
VPS8Q8N3P4 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
VPS8Q8N3P4 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
VPS8Q8N3P4 RPS26P38-201ENST00000414476 348 ntBASIC9.1□□□□□ -0.95
VPS8Q8N3P4 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC9.1□□□□□ -0.95
VPS8Q8N3P4 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC9.1□□□□□ -0.95
VPS8Q8N3P4 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VPS8Q8N3P4 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC9.1□□□□□ -0.95
VPS8Q8N3P4 AC023141.9-201ENST00000458734 412 ntBASIC9.1□□□□□ -0.95
VPS8Q8N3P4 RN7SL174P-201ENST00000475578 289 ntBASIC9.1□□□□□ -0.95
VPS8Q8N3P4 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC9.1□□□□□ -0.95
VPS8Q8N3P4 RNA5SP362-201ENST00000516048 118 ntBASIC9.1□□□□□ -0.95
VPS8Q8N3P4 IGLVIV-64-201ENST00000518581 301 ntBASIC9.1□□□□□ -0.95
VPS8Q8N3P4 HMGB1P42-201ENST00000532126 553 ntBASIC9.1□□□□□ -0.95
VPS8Q8N3P4 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VPS8Q8N3P4 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC9.1□□□□□ -0.95
VPS8Q8N3P4 AC007346.2-201ENST00000564816 892 ntBASIC9.1□□□□□ -0.95
VPS8Q8N3P4 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC9.1□□□□□ -0.95
VPS8Q8N3P4 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
VPS8Q8N3P4 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC9.1□□□□□ -0.95
VPS8Q8N3P4 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
VPS8Q8N3P4 MIR193BHG-214ENST00000641765 509 ntBASIC9.1□□□□□ -0.95
VPS8Q8N3P4 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS8Q8N3P4 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VPS8Q8N3P4 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS8Q8N3P4 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC9.1□□□□□ -0.95
VPS8Q8N3P4 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VPS8Q8N3P4 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
VPS8Q8N3P4 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS8Q8N3P4 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS8Q8N3P4 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS8Q8N3P4 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC9.09□□□□□ -0.95
VPS8Q8N3P4 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
VPS8Q8N3P4 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
VPS8Q8N3P4 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC9.09□□□□□ -0.95
VPS8Q8N3P4 RPL23AP17-201ENST00000401064 499 ntBASIC9.09□□□□□ -0.95
VPS8Q8N3P4 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC9.09□□□□□ -0.95
VPS8Q8N3P4 RN7SKP279-201ENST00000411383 298 ntBASIC9.09□□□□□ -0.95
VPS8Q8N3P4 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC9.09□□□□□ -0.95
VPS8Q8N3P4 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
VPS8Q8N3P4 AC113412.1-201ENST00000425840 504 ntBASIC9.09□□□□□ -0.95
VPS8Q8N3P4 AK3P5-201ENST00000432033 519 ntBASIC9.09□□□□□ -0.95
VPS8Q8N3P4 RN7SL72P-201ENST00000460697 269 ntBASIC9.09□□□□□ -0.95
VPS8Q8N3P4 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC9.09□□□□□ -0.95
VPS8Q8N3P4 RNU6-615P-201ENST00000516065 106 ntBASIC9.09□□□□□ -0.95
VPS8Q8N3P4 CYCSP22-201ENST00000517555 339 ntBASIC9.09□□□□□ -0.95
VPS8Q8N3P4 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC9.09□□□□□ -0.95
VPS8Q8N3P4 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC9.09□□□□□ -0.95
VPS8Q8N3P4 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC9.09□□□□□ -0.95
VPS8Q8N3P4 CU639417.4-201ENST00000623928 207 ntBASIC9.09□□□□□ -0.95
VPS8Q8N3P4 AC022164.1-201ENST00000568767 2673 ntBASIC9.09□□□□□ -0.95
VPS8Q8N3P4 GTF2IP4-201ENST00000453092 2054 ntBASIC9.09□□□□□ -0.95
VPS8Q8N3P4 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS8Q8N3P4 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC9.09□□□□□ -0.95
VPS8Q8N3P4 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS8Q8N3P4 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS8Q8N3P4 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC9.09□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms