Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 RPS27AP6-201ENST00000427962 448 ntBASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 PSMD10P2-201ENST00000432890 672 ntBASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 AC013403.1-201ENST00000436954 263 ntBASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 RPS18P1-201ENST00000447840 458 ntBASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 RPL34P33-201ENST00000486062 334 ntBASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 AC117500.1-201ENST00000497352 755 ntBASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 MIR6774-201ENST00000614651 70 ntBASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 AC069542.2-201ENST00000624816 216 ntBASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 AC007603.3-201ENST00000636915 979 ntBASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 MAPK10-350ENST00000641777 965 ntBASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 AC011416.1-201ENST00000514947 1732 ntBASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 AC016583.1-201ENST00000624221 2431 ntBASIC6.35□□□□□ -1.39
CCDC50Q8IVM0 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 RNA5SP156-201ENST00000410250 110 ntBASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 RPS3AP38-201ENST00000435889 763 ntBASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 NATP-201ENST00000523491 878 ntBASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 BMS1P16-201ENST00000556075 1147 ntBASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 RPSAP75-201ENST00000605848 301 ntBASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 ZNF969P-201ENST00000510345 2341 ntBASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC50Q8IVM0 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
CCDC50Q8IVM0 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
CCDC50Q8IVM0 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
CCDC50Q8IVM0 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.4
CCDC50Q8IVM0 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 OR10R3P-201ENST00000361688 942 ntBASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 SNORA77.2-201ENST00000408571 112 ntBASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 PTCD2P2-201ENST00000415579 1095 ntBASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 RPL23AP40-201ENST00000487630 390 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms