Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 AL662795.2-201ENST00000624252 3706 ntBASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 AC011416.1-201ENST00000514947 1732 ntBASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 AL121835.1-201ENST00000404250 354 ntBASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 GAPDHP57-201ENST00000424400 585 ntBASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 MGAT2P2-201ENST00000427194 797 ntBASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 OR6R1P-201ENST00000431838 940 ntBASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 AL513343.1-201ENST00000451818 792 ntBASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 C1DP3-201ENST00000455013 423 ntBASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 RPS26P11-201ENST00000463445 348 ntBASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 AC008638.1-201ENST00000506035 866 ntBASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 RN7SKP248-201ENST00000516278 305 ntBASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 COX6B1P4-201ENST00000519826 484 ntBASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 AC084337.1-201ENST00000524809 686 ntBASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 AC011270.1-201ENST00000558606 583 ntBASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 AL162574.2-201ENST00000614618 657 ntBASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 AC006213.5-201ENST00000619673 288 ntBASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 AC015660.5-201ENST00000623238 564 ntBASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 AC005858.3-201ENST00000624756 589 ntBASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
PDLIM3Q53GG5 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 MTND5P23-201ENST00000430812 1655 ntBASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 CASC19-228ENST00000641414 1684 ntBASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 AL589826.1-201ENST00000340697 249 ntBASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 SNORD8-201ENST00000363915 110 ntBASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 RN7SKP189-201ENST00000365042 330 ntBASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 VIM2P-201ENST00000402383 1294 ntBASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 RN7SKP144-201ENST00000411108 279 ntBASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 Z68868.1-201ENST00000429048 544 ntBASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 PAICSP2-201ENST00000429118 1150 ntBASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 RPS10P21-201ENST00000430654 475 ntBASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 TRIM60P13-201ENST00000432350 1283 ntBASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 GAPDHP48-201ENST00000436626 961 ntBASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 GAPDHP37-201ENST00000442317 968 ntBASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 SEPT7P3-201ENST00000455017 621 ntBASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 AC084754.1-201ENST00000463466 464 ntBASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 RPS26P6-201ENST00000475156 348 ntBASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.34□□□□□ -1.55
PDLIM3Q53GG5 PPP1R2P6-201ENST00000478565 588 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms