Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 CASC19-274ENST00000642018 970 ntBASIC5.73□□□□□ -1.49
HMGCS1Q01581 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCS1Q01581 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCS1Q01581 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.73□□□□□ -1.49
HMGCS1Q01581 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCS1Q01581 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCS1Q01581 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.73□□□□□ -1.49
HMGCS1Q01581 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCS1Q01581 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCS1Q01581 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.73□□□□□ -1.49
HMGCS1Q01581 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCS1Q01581 AC239868.2-201ENST00000564237 4527 ntBASIC5.73□□□□□ -1.49
HMGCS1Q01581 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCS1Q01581 AC020656.2-201ENST00000613291 5309 ntBASIC5.72□□□□□ -1.49
HMGCS1Q01581 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGCS1Q01581 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGCS1Q01581 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGCS1Q01581 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGCS1Q01581 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMGCS1Q01581 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGCS1Q01581 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.72□□□□□ -1.49
HMGCS1Q01581 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.72□□□□□ -1.49
HMGCS1Q01581 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HMGCS1Q01581 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGCS1Q01581 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGCS1Q01581 RBMY1HP-201ENST00000382759 1389 ntBASIC5.72□□□□□ -1.49
HMGCS1Q01581 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGCS1Q01581 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HMGCS1Q01581 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGCS1Q01581 RNA5SP211-201ENST00000365516 117 ntBASIC5.72□□□□□ -1.49
HMGCS1Q01581 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
HMGCS1Q01581 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGCS1Q01581 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGCS1Q01581 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGCS1Q01581 AC021876.1-201ENST00000425959 359 ntBASIC5.72□□□□□ -1.49
HMGCS1Q01581 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGCS1Q01581 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.72□□□□□ -1.49
HMGCS1Q01581 AL354893.1-201ENST00000433735 348 ntBASIC5.72□□□□□ -1.49
HMGCS1Q01581 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGCS1Q01581 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMGCS1Q01581 OSTCP1-201ENST00000455507 450 ntBASIC5.72□□□□□ -1.49
HMGCS1Q01581 AL603882.1-201ENST00000463059 681 ntBASIC5.72□□□□□ -1.49
HMGCS1Q01581 RPL38P3-201ENST00000484463 213 ntBASIC5.72□□□□□ -1.49
HMGCS1Q01581 RN7SL649P-201ENST00000496974 275 ntBASIC5.72□□□□□ -1.49
HMGCS1Q01581 AC091874.2-201ENST00000505889 720 ntBASIC5.72□□□□□ -1.49
HMGCS1Q01581 AC018797.1-201ENST00000510791 255 ntBASIC5.72□□□□□ -1.49
HMGCS1Q01581 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGCS1Q01581 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.72□□□□□ -1.49
HMGCS1Q01581 HNRNPCP1-201ENST00000556181 766 ntBASIC5.72□□□□□ -1.49
HMGCS1Q01581 AC007346.2-201ENST00000564816 892 ntBASIC5.72□□□□□ -1.49
HMGCS1Q01581 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGCS1Q01581 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGCS1Q01581 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGCS1Q01581 AL138960.1-201ENST00000613838 513 ntBASIC5.72□□□□□ -1.49
HMGCS1Q01581 AL355974.3-201ENST00000617383 467 ntBASIC5.72□□□□□ -1.49
HMGCS1Q01581 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGCS1Q01581 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGCS1Q01581 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGCS1Q01581 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.72□□□□□ -1.49
HMGCS1Q01581 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGCS1Q01581 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.72□□□□□ -1.49
HMGCS1Q01581 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGCS1Q01581 MTCO1P28-201ENST00000574177 1528 ntBASIC5.72□□□□□ -1.49
HMGCS1Q01581 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMGCS1Q01581 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGCS1Q01581 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMGCS1Q01581 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMGCS1Q01581 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMGCS1Q01581 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGCS1Q01581 AC011933.2-201ENST00000578539 2790 ntBASIC5.72□□□□□ -1.49
HMGCS1Q01581 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGCS1Q01581 AC092070.2-203ENST00000598377 3644 ntBASIC5.72□□□□□ -1.49
HMGCS1Q01581 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMGCS1Q01581 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.72□□□□□ -1.49
HMGCS1Q01581 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
HMGCS1Q01581 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
HMGCS1Q01581 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.71□□□□□ -1.49
HMGCS1Q01581 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.71□□□□□ -1.49
HMGCS1Q01581 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
HMGCS1Q01581 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.71□□□□□ -1.49
HMGCS1Q01581 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
HMGCS1Q01581 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
HMGCS1Q01581 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.71□□□□□ -1.49
HMGCS1Q01581 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMGCS1Q01581 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMGCS1Q01581 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
HMGCS1Q01581 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HMGCS1Q01581 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMGCS1Q01581 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.71□□□□□ -1.5
HMGCS1Q01581 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMGCS1Q01581 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.71□□□□□ -1.5
HMGCS1Q01581 MIR1275-201ENST00000408770 80 ntBASIC5.71□□□□□ -1.5
HMGCS1Q01581 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.71□□□□□ -1.5
HMGCS1Q01581 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.71□□□□□ -1.5
HMGCS1Q01581 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.71□□□□□ -1.5
HMGCS1Q01581 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
HMGCS1Q01581 PPIAP7-201ENST00000454070 489 ntBASIC5.71□□□□□ -1.5
HMGCS1Q01581 AC118758.1-202ENST00000454719 225 ntBASIC5.71□□□□□ -1.5
HMGCS1Q01581 RN7SL254P-201ENST00000460609 284 ntBASIC5.71□□□□□ -1.5
HMGCS1Q01581 PFN1P6-201ENST00000476786 399 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms