Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC073464.3-201ENST00000422564 712 ntBASIC5.1□□□□□ -1.59
CX3CL1P78423 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.1□□□□□ -1.59
CX3CL1P78423 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.1□□□□□ -1.59
CX3CL1P78423 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.1□□□□□ -1.59
CX3CL1P78423 AC097721.1-201ENST00000427150 1253 ntBASIC5.1□□□□□ -1.59
CX3CL1P78423 GAPDHP19-201ENST00000431768 1005 ntBASIC5.1□□□□□ -1.59
CX3CL1P78423 OR6R1P-201ENST00000431838 940 ntBASIC5.1□□□□□ -1.59
CX3CL1P78423 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CX3CL1P78423 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
CX3CL1P78423 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC5.1□□□□□ -1.59
CX3CL1P78423 MSL3P1-202ENST00000440028 1468 ntBASIC5.1□□□□□ -1.59
CX3CL1P78423 ZNF736P1Y-201ENST00000440402 1276 ntBASIC5.1□□□□□ -1.59
CX3CL1P78423 CCRL1P1-201ENST00000449542 1053 ntBASIC5.1□□□□□ -1.59
CX3CL1P78423 DDX18P6-201ENST00000450119 1997 ntBASIC5.1□□□□□ -1.59
CX3CL1P78423 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CX3CL1P78423 SAMM50P1-201ENST00000455403 1399 ntBASIC5.1□□□□□ -1.59
CX3CL1P78423 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.1□□□□□ -1.59
CX3CL1P78423 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CX3CL1P78423 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.1□□□□□ -1.59
CX3CL1P78423 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.1□□□□□ -1.59
CX3CL1P78423 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.1□□□□□ -1.59
CX3CL1P78423 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CX3CL1P78423 AC018645.1-201ENST00000505003 109 ntBASIC5.1□□□□□ -1.59
CX3CL1P78423 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.1□□□□□ -1.59
CX3CL1P78423 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.1□□□□□ -1.59
CX3CL1P78423 AC106800.3-201ENST00000511389 308 ntBASIC5.1□□□□□ -1.59
CX3CL1P78423 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.1□□□□□ -1.59
CX3CL1P78423 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.1□□□□□ -1.59
CX3CL1P78423 RNU6-889P-201ENST00000517189 103 ntBASIC5.1□□□□□ -1.59
CX3CL1P78423 IGKV1D-22-201ENST00000518953 324 ntBASIC5.1□□□□□ -1.59
CX3CL1P78423 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.1□□□□□ -1.59
CX3CL1P78423 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CX3CL1P78423 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
CX3CL1P78423 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC5.1□□□□□ -1.59
CX3CL1P78423 AC134349.2-201ENST00000535136 910 ntBASIC5.1□□□□□ -1.59
CX3CL1P78423 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CX3CL1P78423 AC023310.2-201ENST00000553844 547 ntBASIC5.1□□□□□ -1.59
CX3CL1P78423 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.1□□□□□ -1.59
CX3CL1P78423 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.1□□□□□ -1.59
CX3CL1P78423 AC037479.1-201ENST00000558361 625 ntBASIC5.1□□□□□ -1.59
CX3CL1P78423 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC5.1□□□□□ -1.59
CX3CL1P78423 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.1□□□□□ -1.59
CX3CL1P78423 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.1□□□□□ -1.59
CX3CL1P78423 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.1□□□□□ -1.59
CX3CL1P78423 AP001496.3-201ENST00000580230 913 ntBASIC5.1□□□□□ -1.59
CX3CL1P78423 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.1□□□□□ -1.59
CX3CL1P78423 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.1□□□□□ -1.59
CX3CL1P78423 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.1□□□□□ -1.59
CX3CL1P78423 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.1□□□□□ -1.59
CX3CL1P78423 AC135803.1-201ENST00000608748 565 ntBASIC5.1□□□□□ -1.59
CX3CL1P78423 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CX3CL1P78423 AC006213.4-201ENST00000616184 634 ntBASIC5.1□□□□□ -1.59
CX3CL1P78423 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.1□□□□□ -1.59
CX3CL1P78423 AC241377.1-201ENST00000619797 406 ntBASIC5.1□□□□□ -1.59
CX3CL1P78423 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CX3CL1P78423 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.1□□□□□ -1.59
CX3CL1P78423 AC079298.2-201ENST00000623885 459 ntBASIC5.1□□□□□ -1.59
CX3CL1P78423 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.1□□□□□ -1.59
CX3CL1P78423 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.1□□□□□ -1.59
CX3CL1P78423 CASC19-238ENST00000641523 1558 ntBASIC5.1□□□□□ -1.59
CX3CL1P78423 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CX3CL1P78423 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CX3CL1P78423 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CX3CL1P78423 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
CX3CL1P78423 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.1□□□□□ -1.59
CX3CL1P78423 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CX3CL1P78423 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CX3CL1P78423 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CX3CL1P78423 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.09□□□□□ -1.59
CX3CL1P78423 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CX3CL1P78423 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CX3CL1P78423 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.09□□□□□ -1.59
CX3CL1P78423 AC110373.1-201ENST00000505994 3505 ntBASIC5.09□□□□□ -1.59
CX3CL1P78423 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CX3CL1P78423 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.09□□□□□ -1.59
CX3CL1P78423 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CX3CL1P78423 AL353743.3-201ENST00000442109 1468 ntBASIC5.09□□□□□ -1.59
CX3CL1P78423 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CX3CL1P78423 AC125238.2-201ENST00000430003 1440 ntBASIC5.09□□□□□ -1.59
CX3CL1P78423 AL512283.1-201ENST00000606756 1384 ntBASIC5.09□□□□□ -1.59
CX3CL1P78423 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.09□□□□□ -1.59
CX3CL1P78423 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CX3CL1P78423 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.09□□□□□ -1.59
CX3CL1P78423 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CX3CL1P78423 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CX3CL1P78423 SNORD16-201ENST00000362803 99 ntBASIC5.09□□□□□ -1.59
CX3CL1P78423 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.09□□□□□ -1.59
CX3CL1P78423 VIM2P-201ENST00000402383 1294 ntBASIC5.09□□□□□ -1.59
CX3CL1P78423 GLUD1P9-201ENST00000420997 1173 ntBASIC5.09□□□□□ -1.59
CX3CL1P78423 AL157884.1-201ENST00000424561 454 ntBASIC5.09□□□□□ -1.59
CX3CL1P78423 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC5.09□□□□□ -1.59
CX3CL1P78423 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CX3CL1P78423 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.09□□□□□ -1.59
CX3CL1P78423 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.09□□□□□ -1.59
CX3CL1P78423 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.09□□□□□ -1.59
CX3CL1P78423 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC5.09□□□□□ -1.59
CX3CL1P78423 AC074367.1-201ENST00000438685 1125 ntBASIC5.09□□□□□ -1.59
CX3CL1P78423 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.09□□□□□ -1.59
CX3CL1P78423 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.09□□□□□ -1.59
CX3CL1P78423 AL356121.1-201ENST00000442911 156 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms