Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
TPM4P67936 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
TPM4P67936 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TPM4P67936 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TPM4P67936 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TPM4P67936 RNA5SP211-201ENST00000365516 117 ntBASIC6.62□□□□□ -1.35
TPM4P67936 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.62□□□□□ -1.35
TPM4P67936 AC087752.1-201ENST00000391360 558 ntBASIC6.62□□□□□ -1.35
TPM4P67936 AL096829.1-201ENST00000413677 457 ntBASIC6.62□□□□□ -1.35
TPM4P67936 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.62□□□□□ -1.35
TPM4P67936 RPS27AP6-201ENST00000427962 448 ntBASIC6.62□□□□□ -1.35
TPM4P67936 AC099670.2-201ENST00000435130 321 ntBASIC6.62□□□□□ -1.35
TPM4P67936 AC096632.2-201ENST00000438139 1239 ntBASIC6.62□□□□□ -1.35
TPM4P67936 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.62□□□□□ -1.35
TPM4P67936 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.62□□□□□ -1.35
TPM4P67936 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.62□□□□□ -1.35
TPM4P67936 RNU1-88P-201ENST00000459274 128 ntBASIC6.62□□□□□ -1.35
TPM4P67936 AC104164.1-201ENST00000460282 590 ntBASIC6.62□□□□□ -1.35
TPM4P67936 RN7SL39P-201ENST00000462264 297 ntBASIC6.62□□□□□ -1.35
TPM4P67936 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.62□□□□□ -1.35
TPM4P67936 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.62□□□□□ -1.35
TPM4P67936 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.62□□□□□ -1.35
TPM4P67936 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.62□□□□□ -1.35
TPM4P67936 RNA5SP206-201ENST00000516703 121 ntBASIC6.62□□□□□ -1.35
TPM4P67936 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.62□□□□□ -1.35
TPM4P67936 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.62□□□□□ -1.35
TPM4P67936 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TPM4P67936 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.62□□□□□ -1.35
TPM4P67936 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.62□□□□□ -1.35
TPM4P67936 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.62□□□□□ -1.35
TPM4P67936 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.62□□□□□ -1.35
TPM4P67936 AC023206.1-201ENST00000605824 298 ntBASIC6.62□□□□□ -1.35
TPM4P67936 AC083964.1-201ENST00000607549 630 ntBASIC6.62□□□□□ -1.35
TPM4P67936 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TPM4P67936 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TPM4P67936 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
TPM4P67936 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.62□□□□□ -1.35
TPM4P67936 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TPM4P67936 AC139426.3-201ENST00000605648 2059 ntBASIC6.62□□□□□ -1.35
TPM4P67936 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.62□□□□□ -1.35
TPM4P67936 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TPM4P67936 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.61□□□□□ -1.35
TPM4P67936 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
TPM4P67936 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.61□□□□□ -1.35
TPM4P67936 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
TPM4P67936 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TPM4P67936 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
TPM4P67936 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TPM4P67936 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.61□□□□□ -1.35
TPM4P67936 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
TPM4P67936 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TPM4P67936 SNORD94-201ENST00000386037 137 ntBASIC6.61□□□□□ -1.35
TPM4P67936 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TPM4P67936 AL033519.1-201ENST00000407266 307 ntBASIC6.61□□□□□ -1.35
TPM4P67936 OR52N3P-201ENST00000413417 934 ntBASIC6.61□□□□□ -1.35
TPM4P67936 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.61□□□□□ -1.35
TPM4P67936 CLCN3P1-201ENST00000423965 1017 ntBASIC6.61□□□□□ -1.35
TPM4P67936 AC099677.3-201ENST00000427081 395 ntBASIC6.61□□□□□ -1.35
TPM4P67936 AL645936.1-201ENST00000441979 518 ntBASIC6.61□□□□□ -1.35
TPM4P67936 AL158214.1-201ENST00000444423 404 ntBASIC6.61□□□□□ -1.35
TPM4P67936 AL354872.1-201ENST00000456361 967 ntBASIC6.61□□□□□ -1.35
TPM4P67936 RN7SL83P-201ENST00000468131 297 ntBASIC6.61□□□□□ -1.35
TPM4P67936 RN7SL655P-201ENST00000486087 298 ntBASIC6.61□□□□□ -1.35
TPM4P67936 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.61□□□□□ -1.35
TPM4P67936 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.61□□□□□ -1.35
TPM4P67936 AC021269.1-201ENST00000526860 705 ntBASIC6.61□□□□□ -1.35
TPM4P67936 AC124891.1-201ENST00000536322 519 ntBASIC6.61□□□□□ -1.35
TPM4P67936 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.61□□□□□ -1.35
TPM4P67936 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.61□□□□□ -1.35
TPM4P67936 OR7E19P-202ENST00000589942 844 ntBASIC6.61□□□□□ -1.35
TPM4P67936 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.61□□□□□ -1.35
TPM4P67936 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TPM4P67936 AC036176.3-201ENST00000602456 418 ntBASIC6.61□□□□□ -1.35
TPM4P67936 AL583832.1-201ENST00000603227 784 ntBASIC6.61□□□□□ -1.35
TPM4P67936 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC6.61□□□□□ -1.35
TPM4P67936 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TPM4P67936 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.61□□□□□ -1.35
TPM4P67936 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.61□□□□□ -1.35
TPM4P67936 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.61□□□□□ -1.35
TPM4P67936 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TPM4P67936 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.61□□□□□ -1.35
TPM4P67936 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
TPM4P67936 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
TPM4P67936 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
TPM4P67936 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.61□□□□□ -1.35
TPM4P67936 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TPM4P67936 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TPM4P67936 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TPM4P67936 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TPM4P67936 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.6□□□□□ -1.35
TPM4P67936 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
TPM4P67936 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TPM4P67936 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
TPM4P67936 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
TPM4P67936 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
TPM4P67936 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.6□□□□□ -1.35
TPM4P67936 SSR1P1-201ENST00000407630 814 ntBASIC6.6□□□□□ -1.35
TPM4P67936 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.6□□□□□ -1.35
TPM4P67936 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.6□□□□□ -1.35
TPM4P67936 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms