Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.49□□□□□ -1.37
HDAC4P56524 AL713998.2-201ENST00000604538 1198 ntBASIC6.49□□□□□ -1.37
HDAC4P56524 AC073389.3-201ENST00000609434 935 ntBASIC6.49□□□□□ -1.37
HDAC4P56524 AC022106.1-201ENST00000612834 766 ntBASIC6.49□□□□□ -1.37
HDAC4P56524 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HDAC4P56524 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
HDAC4P56524 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
HDAC4P56524 AC018717.1-201ENST00000457712 1505 ntBASIC6.49□□□□□ -1.37
HDAC4P56524 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HDAC4P56524 AC027279.1-201ENST00000568885 4284 ntBASIC6.49□□□□□ -1.37
HDAC4P56524 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HDAC4P56524 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HDAC4P56524 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HDAC4P56524 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.49□□□□□ -1.37
HDAC4P56524 HSPD1P8-201ENST00000400121 1658 ntBASIC6.49□□□□□ -1.37
HDAC4P56524 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.49□□□□□ -1.37
HDAC4P56524 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
HDAC4P56524 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.49□□□□□ -1.37
HDAC4P56524 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.48□□□□□ -1.37
HDAC4P56524 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.48□□□□□ -1.37
HDAC4P56524 AC015689.2-201ENST00000528172 1738 ntBASIC6.48□□□□□ -1.37
HDAC4P56524 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HDAC4P56524 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HDAC4P56524 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HDAC4P56524 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.48□□□□□ -1.37
HDAC4P56524 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HDAC4P56524 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC6.48□□□□□ -1.37
HDAC4P56524 AC007562.1-201ENST00000421819 517 ntBASIC6.48□□□□□ -1.37
HDAC4P56524 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.48□□□□□ -1.37
HDAC4P56524 RPSAP32-201ENST00000432681 526 ntBASIC6.48□□□□□ -1.37
HDAC4P56524 PPIAP10-201ENST00000438675 458 ntBASIC6.48□□□□□ -1.37
HDAC4P56524 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
HDAC4P56524 GAPDHP23-201ENST00000444823 993 ntBASIC6.48□□□□□ -1.37
HDAC4P56524 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HDAC4P56524 AC023274.2-201ENST00000445264 521 ntBASIC6.48□□□□□ -1.37
HDAC4P56524 HIGD1AP16-201ENST00000450986 258 ntBASIC6.48□□□□□ -1.37
HDAC4P56524 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.48□□□□□ -1.37
HDAC4P56524 RN7SL552P-201ENST00000462094 276 ntBASIC6.48□□□□□ -1.37
HDAC4P56524 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.48□□□□□ -1.37
HDAC4P56524 RN7SL568P-201ENST00000493069 298 ntBASIC6.48□□□□□ -1.37
HDAC4P56524 SNX18P24-201ENST00000505249 671 ntBASIC6.48□□□□□ -1.37
HDAC4P56524 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.48□□□□□ -1.37
HDAC4P56524 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HDAC4P56524 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.48□□□□□ -1.37
HDAC4P56524 AC092865.1-201ENST00000544395 1023 ntBASIC6.48□□□□□ -1.37
HDAC4P56524 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.48□□□□□ -1.37
HDAC4P56524 AC016839.1-201ENST00000578162 867 ntBASIC6.48□□□□□ -1.37
HDAC4P56524 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC6.48□□□□□ -1.37
HDAC4P56524 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.48□□□□□ -1.37
HDAC4P56524 AC011500.1-201ENST00000601963 469 ntBASIC6.48□□□□□ -1.37
HDAC4P56524 RPSAP75-201ENST00000605848 301 ntBASIC6.48□□□□□ -1.37
HDAC4P56524 uc_338.29-201ENST00000615099 168 ntBASIC6.48□□□□□ -1.37
HDAC4P56524 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.48□□□□□ -1.37
HDAC4P56524 AC003992.1-201ENST00000635364 557 ntBASIC6.48□□□□□ -1.37
HDAC4P56524 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.48□□□□□ -1.37
HDAC4P56524 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
HDAC4P56524 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
HDAC4P56524 AC125336.1-201ENST00000508893 2827 ntBASIC6.48□□□□□ -1.37
HDAC4P56524 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HDAC4P56524 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
HDAC4P56524 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.48□□□□□ -1.37
HDAC4P56524 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
HDAC4P56524 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HDAC4P56524 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HDAC4P56524 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
HDAC4P56524 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.47□□□□□ -1.37
HDAC4P56524 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
HDAC4P56524 SHQ1P1-201ENST00000437111 1544 ntBASIC6.47□□□□□ -1.37
HDAC4P56524 AC232271.1-201ENST00000602455 2715 ntBASIC6.47□□□□□ -1.37
HDAC4P56524 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.47□□□□□ -1.37
HDAC4P56524 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.47□□□□□ -1.37
HDAC4P56524 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
HDAC4P56524 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HDAC4P56524 RN7SKP250-201ENST00000363924 321 ntBASIC6.47□□□□□ -1.37
HDAC4P56524 LCN1P2-201ENST00000372030 223 ntBASIC6.47□□□□□ -1.37
HDAC4P56524 MIR188-201ENST00000385034 86 ntBASIC6.47□□□□□ -1.37
HDAC4P56524 AL139805.1-201ENST00000407837 289 ntBASIC6.47□□□□□ -1.37
HDAC4P56524 THEM7P-201ENST00000419556 672 ntBASIC6.47□□□□□ -1.37
HDAC4P56524 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.47□□□□□ -1.37
HDAC4P56524 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.47□□□□□ -1.37
HDAC4P56524 AC073594.1-201ENST00000462065 364 ntBASIC6.47□□□□□ -1.37
HDAC4P56524 AC095052.1-201ENST00000509955 863 ntBASIC6.47□□□□□ -1.37
HDAC4P56524 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.47□□□□□ -1.37
HDAC4P56524 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.47□□□□□ -1.37
HDAC4P56524 AP003033.2-201ENST00000528901 805 ntBASIC6.47□□□□□ -1.37
HDAC4P56524 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HDAC4P56524 AC090115.2-201ENST00000548060 883 ntBASIC6.47□□□□□ -1.37
HDAC4P56524 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.47□□□□□ -1.37
HDAC4P56524 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.47□□□□□ -1.37
HDAC4P56524 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.47□□□□□ -1.37
HDAC4P56524 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.47□□□□□ -1.37
HDAC4P56524 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.47□□□□□ -1.37
HDAC4P56524 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.47□□□□□ -1.37
HDAC4P56524 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.47□□□□□ -1.37
HDAC4P56524 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC6.47□□□□□ -1.37
HDAC4P56524 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.47□□□□□ -1.37
HDAC4P56524 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.47□□□□□ -1.37
HDAC4P56524 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.47□□□□□ -1.37
HDAC4P56524 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HDAC4P56524 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms