Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.6□□□□□ -1.35
COPAP53621 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
COPAP53621 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
COPAP53621 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
COPAP53621 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.59□□□□□ -1.35
COPAP53621 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
COPAP53621 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
COPAP53621 AC083899.2-201ENST00000423285 1376 ntBASIC6.59□□□□□ -1.35
COPAP53621 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
COPAP53621 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
COPAP53621 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.59□□□□□ -1.35
COPAP53621 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
COPAP53621 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.59□□□□□ -1.35
COPAP53621 AC087565.3-202ENST00000642085 1603 ntBASIC6.59□□□□□ -1.35
COPAP53621 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
COPAP53621 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
COPAP53621 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
COPAP53621 RNA5SP188-201ENST00000362916 129 ntBASIC6.59□□□□□ -1.35
COPAP53621 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.59□□□□□ -1.35
COPAP53621 AL035422.1-201ENST00000414193 397 ntBASIC6.59□□□□□ -1.35
COPAP53621 AL357078.2-201ENST00000416486 427 ntBASIC6.59□□□□□ -1.35
COPAP53621 DPPA2P2-201ENST00000418220 897 ntBASIC6.59□□□□□ -1.35
COPAP53621 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.59□□□□□ -1.35
COPAP53621 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.59□□□□□ -1.35
COPAP53621 PSMD10P2-201ENST00000432890 672 ntBASIC6.59□□□□□ -1.35
COPAP53621 AC074367.1-201ENST00000438685 1125 ntBASIC6.59□□□□□ -1.35
COPAP53621 RPL12P11-201ENST00000439970 501 ntBASIC6.59□□□□□ -1.35
COPAP53621 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.59□□□□□ -1.35
COPAP53621 MTND5P8-201ENST00000449817 1083 ntBASIC6.59□□□□□ -1.35
COPAP53621 AC144530.1-201ENST00000452862 555 ntBASIC6.59□□□□□ -1.35
COPAP53621 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
COPAP53621 RNA5SP418-201ENST00000515951 117 ntBASIC6.59□□□□□ -1.35
COPAP53621 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.59□□□□□ -1.35
COPAP53621 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.59□□□□□ -1.35
COPAP53621 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.59□□□□□ -1.35
COPAP53621 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.59□□□□□ -1.35
COPAP53621 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.59□□□□□ -1.35
COPAP53621 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.59□□□□□ -1.35
COPAP53621 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC6.59□□□□□ -1.35
COPAP53621 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC6.59□□□□□ -1.35
COPAP53621 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.59□□□□□ -1.35
COPAP53621 AC005632.2-201ENST00000564271 828 ntBASIC6.59□□□□□ -1.35
COPAP53621 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.59□□□□□ -1.35
COPAP53621 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.59□□□□□ -1.35
COPAP53621 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.59□□□□□ -1.35
COPAP53621 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.59□□□□□ -1.35
COPAP53621 AL589863.1-201ENST00000595383 631 ntBASIC6.59□□□□□ -1.35
COPAP53621 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.59□□□□□ -1.35
COPAP53621 AC125494.2-201ENST00000602431 657 ntBASIC6.59□□□□□ -1.35
COPAP53621 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.59□□□□□ -1.35
COPAP53621 AC135803.1-201ENST00000608748 565 ntBASIC6.59□□□□□ -1.35
COPAP53621 U1.34-201ENST00000618578 162 ntBASIC6.59□□□□□ -1.35
COPAP53621 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.59□□□□□ -1.35
COPAP53621 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.59□□□□□ -1.35
COPAP53621 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.59□□□□□ -1.35
COPAP53621 MAPK10-350ENST00000641777 965 ntBASIC6.59□□□□□ -1.35
COPAP53621 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.59□□□□□ -1.35
COPAP53621 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
COPAP53621 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
COPAP53621 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.59□□□□□ -1.35
COPAP53621 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.59□□□□□ -1.35
COPAP53621 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
COPAP53621 MTCO1P25-201ENST00000414449 1799 ntBASIC6.59□□□□□ -1.35
COPAP53621 SNX18P3-202ENST00000565670 1750 ntBASIC6.59□□□□□ -1.35
COPAP53621 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
COPAP53621 AC018628.1-201ENST00000624147 3819 ntBASIC6.59□□□□□ -1.36
COPAP53621 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
COPAP53621 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
COPAP53621 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
COPAP53621 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COPAP53621 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.58□□□□□ -1.36
COPAP53621 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COPAP53621 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COPAP53621 AL512283.1-201ENST00000606756 1384 ntBASIC6.58□□□□□ -1.36
COPAP53621 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.58□□□□□ -1.36
COPAP53621 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COPAP53621 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.58□□□□□ -1.36
COPAP53621 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.58□□□□□ -1.36
COPAP53621 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
COPAP53621 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COPAP53621 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COPAP53621 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COPAP53621 RNU4-39P-201ENST00000362455 127 ntBASIC6.58□□□□□ -1.36
COPAP53621 RNU6-697P-201ENST00000363348 107 ntBASIC6.58□□□□□ -1.36
COPAP53621 AL353625.1-202ENST00000366273 571 ntBASIC6.58□□□□□ -1.36
COPAP53621 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.58□□□□□ -1.36
COPAP53621 AL049697.3-201ENST00000406493 982 ntBASIC6.58□□□□□ -1.36
COPAP53621 AC098592.2-201ENST00000413158 265 ntBASIC6.58□□□□□ -1.36
COPAP53621 RPL23AP18-201ENST00000416139 468 ntBASIC6.58□□□□□ -1.36
COPAP53621 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6.58□□□□□ -1.36
COPAP53621 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COPAP53621 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
COPAP53621 AC007679.3-201ENST00000434035 414 ntBASIC6.58□□□□□ -1.36
COPAP53621 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.58□□□□□ -1.36
COPAP53621 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.58□□□□□ -1.36
COPAP53621 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
COPAP53621 AL355355.1-201ENST00000442900 793 ntBASIC6.58□□□□□ -1.36
COPAP53621 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.58□□□□□ -1.36
COPAP53621 PPP1R11P1-201ENST00000486095 376 ntBASIC6.58□□□□□ -1.36
COPAP53621 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms