Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC10.28□□□□□ -0.76
SMARCA4P51532 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SMARCA4P51532 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC10.28□□□□□ -0.76
SMARCA4P51532 CYP4F27P-201ENST00000514557 494 ntBASIC10.28□□□□□ -0.76
SMARCA4P51532 RN7SKP66-201ENST00000516681 231 ntBASIC10.28□□□□□ -0.76
SMARCA4P51532 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC10.28□□□□□ -0.76
SMARCA4P51532 AC090424.1-201ENST00000535243 736 ntBASIC10.28□□□□□ -0.76
SMARCA4P51532 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC10.28□□□□□ -0.76
SMARCA4P51532 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC10.28□□□□□ -0.76
SMARCA4P51532 MIR4311-201ENST00000580794 100 ntBASIC10.28□□□□□ -0.76
SMARCA4P51532 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC10.28□□□□□ -0.76
SMARCA4P51532 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
SMARCA4P51532 RUNX1T1-250ENST00000614812 7483 ntAPPRIS P3 TSL 5 BASIC10.28□□□□□ -0.76
SMARCA4P51532 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
SMARCA4P51532 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SMARCA4P51532 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
SMARCA4P51532 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SMARCA4P51532 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.76
SMARCA4P51532 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
SMARCA4P51532 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
SMARCA4P51532 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SMARCA4P51532 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
SMARCA4P51532 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC10.27□□□□□ -0.77
SMARCA4P51532 AC079922.1-201ENST00000443291 359 ntBASIC10.27□□□□□ -0.77
SMARCA4P51532 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC10.27□□□□□ -0.77
SMARCA4P51532 AL389915.2-201ENST00000454576 441 ntBASIC10.27□□□□□ -0.77
SMARCA4P51532 FTH1P2-201ENST00000466086 412 ntBASIC10.27□□□□□ -0.77
SMARCA4P51532 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC10.27□□□□□ -0.77
SMARCA4P51532 RPL7P6-201ENST00000480903 738 ntBASIC10.27□□□□□ -0.77
SMARCA4P51532 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC10.27□□□□□ -0.77
SMARCA4P51532 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC10.27□□□□□ -0.77
SMARCA4P51532 HNRNPCP1-201ENST00000556181 766 ntBASIC10.27□□□□□ -0.77
SMARCA4P51532 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC10.27□□□□□ -0.77
SMARCA4P51532 AC090527.3-201ENST00000619041 548 ntBASIC10.27□□□□□ -0.77
SMARCA4P51532 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
SMARCA4P51532 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
SMARCA4P51532 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SMARCA4P51532 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SMARCA4P51532 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SMARCA4P51532 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC10.26□□□□□ -0.77
SMARCA4P51532 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SMARCA4P51532 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SMARCA4P51532 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
SMARCA4P51532 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC10.26□□□□□ -0.77
SMARCA4P51532 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC10.26□□□□□ -0.77
SMARCA4P51532 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC10.26□□□□□ -0.77
SMARCA4P51532 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC10.26□□□□□ -0.77
SMARCA4P51532 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC10.26□□□□□ -0.77
SMARCA4P51532 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC10.26□□□□□ -0.77
SMARCA4P51532 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SMARCA4P51532 TLN2-211ENST00000636159 7441 ntTSL 5 BASIC10.26□□□□□ -0.77
SMARCA4P51532 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
SMARCA4P51532 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
SMARCA4P51532 CDY5P-201ENST00000411487 1580 ntBASIC10.26□□□□□ -0.77
SMARCA4P51532 CDY9P-201ENST00000451397 1580 ntBASIC10.26□□□□□ -0.77
SMARCA4P51532 ATM-215ENST00000530958 5718 ntTSL 2 BASIC10.26□□□□□ -0.77
SMARCA4P51532 COL6A4P1-202ENST00000487147 4317 ntBASIC10.26□□□□□ -0.77
SMARCA4P51532 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SMARCA4P51532 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC10.25□□□□□ -0.77
SMARCA4P51532 AC074255.1-201ENST00000511259 501 ntBASIC10.25□□□□□ -0.77
SMARCA4P51532 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC10.25□□□□□ -0.77
SMARCA4P51532 ELOCP28-201ENST00000590044 317 ntBASIC10.25□□□□□ -0.77
SMARCA4P51532 AC087783.2-201ENST00000605070 562 ntBASIC10.25□□□□□ -0.77
SMARCA4P51532 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC10.25□□□□□ -0.77
SMARCA4P51532 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
SMARCA4P51532 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SMARCA4P51532 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC10.25□□□□□ -0.77
SMARCA4P51532 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC10.25□□□□□ -0.77
SMARCA4P51532 AL359922.2-201ENST00000581788 3017 ntBASIC10.25□□□□□ -0.77
SMARCA4P51532 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC10.25□□□□□ -0.77
SMARCA4P51532 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
SMARCA4P51532 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC10.25□□□□□ -0.77
SMARCA4P51532 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SMARCA4P51532 AC005618.1-201ENST00000606901 3148 ntBASIC10.25□□□□□ -0.77
SMARCA4P51532 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
SMARCA4P51532 AL034549.2-201ENST00000618285 3373 ntBASIC10.25□□□□□ -0.77
SMARCA4P51532 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SMARCA4P51532 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SMARCA4P51532 CTAGE11P-201ENST00000451540 2353 ntBASIC10.25□□□□□ -0.77
SMARCA4P51532 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC10.25□□□□□ -0.77
SMARCA4P51532 LDHAP2-201ENST00000437325 985 ntBASIC10.25□□□□□ -0.77
SMARCA4P51532 RN7SL51P-201ENST00000468230 285 ntBASIC10.25□□□□□ -0.77
SMARCA4P51532 RN7SL97P-201ENST00000486780 299 ntBASIC10.25□□□□□ -0.77
SMARCA4P51532 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC10.25□□□□□ -0.77
SMARCA4P51532 AP001922.4-201ENST00000526967 290 ntBASIC10.25□□□□□ -0.77
SMARCA4P51532 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SMARCA4P51532 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC10.25□□□□□ -0.77
SMARCA4P51532 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SMARCA4P51532 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC10.24□□□□□ -0.77
SMARCA4P51532 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
SMARCA4P51532 ABCA11P-202ENST00000504019 2110 ntBASIC10.24□□□□□ -0.77
SMARCA4P51532 AL353763.1-201ENST00000624467 1628 ntBASIC10.24□□□□□ -0.77
SMARCA4P51532 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
SMARCA4P51532 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SMARCA4P51532 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
SMARCA4P51532 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
SMARCA4P51532 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SMARCA4P51532 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC10.24□□□□□ -0.77
SMARCA4P51532 MTHFD2P5-201ENST00000320415 844 ntBASIC10.24□□□□□ -0.77
SMARCA4P51532 RN7SKP104-201ENST00000362605 328 ntBASIC10.24□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms