Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 RN7SKP50-201ENST00000364694 315 ntBASIC7.14□□□□□ -1.27
NID1P14543 Y_RNA.326-201ENST00000365176 113 ntBASIC7.14□□□□□ -1.27
NID1P14543 Y_RNA.356-201ENST00000365475 113 ntBASIC7.14□□□□□ -1.27
NID1P14543 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NID1P14543 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
NID1P14543 SRI-202ENST00000394641 653 ntTSL 2 BASIC7.14□□□□□ -1.27
NID1P14543 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
NID1P14543 RN7SKP56-201ENST00000410513 331 ntBASIC7.14□□□□□ -1.27
NID1P14543 RBFOX2-207ENST00000414461 1706 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NID1P14543 VN1R36P-201ENST00000414936 291 ntBASIC7.14□□□□□ -1.27
NID1P14543 AC092042.2-201ENST00000417304 331 ntBASIC7.14□□□□□ -1.27
NID1P14543 SDCBPP3-201ENST00000419629 891 ntBASIC7.14□□□□□ -1.27
NID1P14543 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC7.14□□□□□ -1.27
NID1P14543 MTND2P23-201ENST00000422990 651 ntBASIC7.14□□□□□ -1.27
NID1P14543 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC7.14□□□□□ -1.27
NID1P14543 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC7.14□□□□□ -1.27
NID1P14543 LINC00665-202ENST00000427868 690 ntTSL 3 BASIC7.14□□□□□ -1.27
NID1P14543 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NID1P14543 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC7.14□□□□□ -1.27
NID1P14543 ETF1P3-201ENST00000430422 1160 ntBASIC7.14□□□□□ -1.27
NID1P14543 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC7.14□□□□□ -1.27
NID1P14543 AC005534.2-201ENST00000431047 433 ntBASIC7.14□□□□□ -1.27
NID1P14543 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NID1P14543 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC7.14□□□□□ -1.27
NID1P14543 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC7.14□□□□□ -1.27
NID1P14543 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC7.14□□□□□ -1.27
NID1P14543 AC096632.2-201ENST00000438139 1239 ntBASIC7.14□□□□□ -1.27
NID1P14543 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC7.14□□□□□ -1.27
NID1P14543 ARL5AP2-201ENST00000444698 533 ntBASIC7.14□□□□□ -1.27
NID1P14543 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC7.14□□□□□ -1.27
NID1P14543 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC7.14□□□□□ -1.27
NID1P14543 AC239798.1-201ENST00000449024 1176 ntBASIC7.14□□□□□ -1.27
NID1P14543 PSPHP1-201ENST00000450062 261 ntBASIC7.14□□□□□ -1.27
NID1P14543 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC7.14□□□□□ -1.27
NID1P14543 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC7.14□□□□□ -1.27
NID1P14543 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC7.14□□□□□ -1.27
NID1P14543 AC124861.1-201ENST00000457178 429 ntTSL 5 BASIC7.14□□□□□ -1.27
NID1P14543 Z99496.1-201ENST00000469424 1477 ntBASIC7.14□□□□□ -1.27
NID1P14543 PA2G4P4-201ENST00000473864 1182 ntBASIC7.14□□□□□ -1.27
NID1P14543 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC7.14□□□□□ -1.27
NID1P14543 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC7.14□□□□□ -1.27
NID1P14543 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC7.14□□□□□ -1.27
NID1P14543 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC7.14□□□□□ -1.27
NID1P14543 AC073648.3-201ENST00000504939 925 ntBASIC7.14□□□□□ -1.27
NID1P14543 GAPDHP61-201ENST00000507324 1005 ntBASIC7.14□□□□□ -1.27
NID1P14543 AC109445.1-201ENST00000512356 383 ntBASIC7.14□□□□□ -1.27
NID1P14543 RN7SKP14-201ENST00000516000 329 ntBASIC7.14□□□□□ -1.27
NID1P14543 PTTG3P-201ENST00000521862 606 ntBASIC7.14□□□□□ -1.27
NID1P14543 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC7.14□□□□□ -1.27
NID1P14543 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.14□□□□□ -1.27
NID1P14543 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC7.14□□□□□ -1.27
NID1P14543 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC7.14□□□□□ -1.27
NID1P14543 AC109460.4-201ENST00000561471 454 ntTSL 3 BASIC7.14□□□□□ -1.27
NID1P14543 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC7.14□□□□□ -1.27
NID1P14543 OR4K7P-201ENST00000580232 945 ntBASIC7.14□□□□□ -1.27
NID1P14543 MIR4437-201ENST00000581331 60 ntBASIC7.14□□□□□ -1.27
NID1P14543 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC7.14□□□□□ -1.27
NID1P14543 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC7.14□□□□□ -1.27
NID1P14543 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC7.14□□□□□ -1.27
NID1P14543 AL161729.3-201ENST00000603533 673 ntBASIC7.14□□□□□ -1.27
NID1P14543 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.14□□□□□ -1.27
NID1P14543 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NID1P14543 AC135507.2-201ENST00000612443 309 ntBASIC7.14□□□□□ -1.27
NID1P14543 AC090574.1-201ENST00000623186 233 ntBASIC7.14□□□□□ -1.27
NID1P14543 AC079456.1-201ENST00000624010 480 ntBASIC7.14□□□□□ -1.27
NID1P14543 AC010653.3-201ENST00000635332 232 ntBASIC7.14□□□□□ -1.27
NID1P14543 AC241585.4-201ENST00000640951 686 ntBASIC7.14□□□□□ -1.27
NID1P14543 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
NID1P14543 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NID1P14543 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC7.14□□□□□ -1.27
NID1P14543 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
NID1P14543 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC7.14□□□□□ -1.27
NID1P14543 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
NID1P14543 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
NID1P14543 AC023818.2-201ENST00000623817 2304 ntBASIC7.13□□□□□ -1.27
NID1P14543 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NID1P14543 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
NID1P14543 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.13□□□□□ -1.27
NID1P14543 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NID1P14543 AL079343.1-201ENST00000572358 1771 ntBASIC7.13□□□□□ -1.27
NID1P14543 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NID1P14543 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
NID1P14543 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NID1P14543 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NID1P14543 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NID1P14543 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NID1P14543 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NID1P14543 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
NID1P14543 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NID1P14543 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
NID1P14543 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC7.13□□□□□ -1.27
NID1P14543 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NID1P14543 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NID1P14543 RNA5SP378-201ENST00000363646 120 ntBASIC7.13□□□□□ -1.27
NID1P14543 Y_RNA.160-201ENST00000363677 92 ntBASIC7.13□□□□□ -1.27
NID1P14543 PDHA1-202ENST00000379804 709 ntTSL 2 BASIC7.13□□□□□ -1.27
NID1P14543 SNORA10-201ENST00000384084 133 ntBASIC7.13□□□□□ -1.27
NID1P14543 RNU6-549P-201ENST00000384433 107 ntBASIC7.13□□□□□ -1.27
NID1P14543 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
NID1P14543 METTL5-204ENST00000409340 472 ntTSL 5 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 191.9 ms