Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RPL7L1P3-201ENST00000455249 689 ntBASIC6.64□□□□□ -1.35
COL11A1P12107 AC087672.1-201ENST00000479876 766 ntBASIC6.64□□□□□ -1.35
COL11A1P12107 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.64□□□□□ -1.35
COL11A1P12107 AP006245.2-201ENST00000522004 300 ntBASIC6.64□□□□□ -1.35
COL11A1P12107 HAUS8P1-201ENST00000549005 542 ntBASIC6.64□□□□□ -1.35
COL11A1P12107 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.64□□□□□ -1.35
COL11A1P12107 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.64□□□□□ -1.35
COL11A1P12107 AL355974.3-201ENST00000617383 467 ntBASIC6.64□□□□□ -1.35
COL11A1P12107 AL035661.1-201ENST00000620459 1144 ntBASIC6.64□□□□□ -1.35
COL11A1P12107 MIR8080-201ENST00000622224 89 ntBASIC6.64□□□□□ -1.35
COL11A1P12107 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.64□□□□□ -1.35
COL11A1P12107 AL355377.1-201ENST00000621125 1653 ntBASIC6.64□□□□□ -1.35
COL11A1P12107 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL11A1P12107 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC6.64□□□□□ -1.35
COL11A1P12107 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
COL11A1P12107 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
COL11A1P12107 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL11A1P12107 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
COL11A1P12107 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.63□□□□□ -1.35
COL11A1P12107 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
COL11A1P12107 PRUNEP1-201ENST00000425846 705 ntBASIC6.63□□□□□ -1.35
COL11A1P12107 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.63□□□□□ -1.35
COL11A1P12107 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.63□□□□□ -1.35
COL11A1P12107 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.63□□□□□ -1.35
COL11A1P12107 FABP5P2-201ENST00000439042 408 ntBASIC6.63□□□□□ -1.35
COL11A1P12107 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
COL11A1P12107 RANP1-206ENST00000455094 651 ntBASIC6.63□□□□□ -1.35
COL11A1P12107 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.63□□□□□ -1.35
COL11A1P12107 RN7SL727P-201ENST00000482164 296 ntBASIC6.63□□□□□ -1.35
COL11A1P12107 AC093270.2-201ENST00000486157 792 ntBASIC6.63□□□□□ -1.35
COL11A1P12107 COX6B1P2-201ENST00000489624 230 ntBASIC6.63□□□□□ -1.35
COL11A1P12107 RBM22P1-201ENST00000578589 1214 ntBASIC6.63□□□□□ -1.35
COL11A1P12107 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.63□□□□□ -1.35
COL11A1P12107 BNIP3P32-201ENST00000600015 554 ntBASIC6.63□□□□□ -1.35
COL11A1P12107 AC024940.4-201ENST00000605507 246 ntBASIC6.63□□□□□ -1.35
COL11A1P12107 MIR193BHG-214ENST00000641765 509 ntBASIC6.63□□□□□ -1.35
COL11A1P12107 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.63□□□□□ -1.35
COL11A1P12107 AC053481.2-202ENST00000582394 1500 ntBASIC6.63□□□□□ -1.35
COL11A1P12107 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
COL11A1P12107 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
COL11A1P12107 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.63□□□□□ -1.35
COL11A1P12107 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.63□□□□□ -1.35
COL11A1P12107 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL11A1P12107 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
COL11A1P12107 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
COL11A1P12107 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
COL11A1P12107 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.63□□□□□ -1.35
COL11A1P12107 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL11A1P12107 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
COL11A1P12107 SNORA74A-201ENST00000364089 198 ntBASIC6.62□□□□□ -1.35
COL11A1P12107 AP003170.5-201ENST00000397185 335 ntBASIC6.62□□□□□ -1.35
COL11A1P12107 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL11A1P12107 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.62□□□□□ -1.35
COL11A1P12107 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.62□□□□□ -1.35
COL11A1P12107 CYCSP6-201ENST00000434498 302 ntBASIC6.62□□□□□ -1.35
COL11A1P12107 AL450023.1-201ENST00000450868 751 ntBASIC6.62□□□□□ -1.35
COL11A1P12107 VDAC2P4-201ENST00000452925 711 ntBASIC6.62□□□□□ -1.35
COL11A1P12107 AP000547.1-201ENST00000454360 617 ntBASIC6.62□□□□□ -1.35
COL11A1P12107 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.62□□□□□ -1.35
COL11A1P12107 AL445687.2-201ENST00000458156 728 ntBASIC6.62□□□□□ -1.35
COL11A1P12107 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL11A1P12107 SCARNA6.1-201ENST00000516989 238 ntBASIC6.62□□□□□ -1.35
COL11A1P12107 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.62□□□□□ -1.35
COL11A1P12107 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.62□□□□□ -1.35
COL11A1P12107 AC106730.2-201ENST00000566641 540 ntBASIC6.62□□□□□ -1.35
COL11A1P12107 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.62□□□□□ -1.35
COL11A1P12107 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.62□□□□□ -1.35
COL11A1P12107 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.62□□□□□ -1.35
COL11A1P12107 AC007683.2-201ENST00000624681 714 ntBASIC6.62□□□□□ -1.35
COL11A1P12107 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.62□□□□□ -1.35
COL11A1P12107 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL11A1P12107 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL11A1P12107 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.62□□□□□ -1.35
COL11A1P12107 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL11A1P12107 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL11A1P12107 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
COL11A1P12107 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC6.62□□□□□ -1.35
COL11A1P12107 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
COL11A1P12107 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
COL11A1P12107 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL11A1P12107 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.62□□□□□ -1.35
COL11A1P12107 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.62□□□□□ -1.35
COL11A1P12107 AC016027.5-201ENST00000427227 210 ntBASIC6.62□□□□□ -1.35
COL11A1P12107 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL11A1P12107 CT45A11P-201ENST00000448043 1134 ntBASIC6.62□□□□□ -1.35
COL11A1P12107 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.62□□□□□ -1.35
COL11A1P12107 DUTP7-201ENST00000507982 486 ntBASIC6.62□□□□□ -1.35
COL11A1P12107 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.62□□□□□ -1.35
COL11A1P12107 AL450226.2-201ENST00000622913 439 ntBASIC6.62□□□□□ -1.35
COL11A1P12107 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC6.61□□□□□ -1.35
COL11A1P12107 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL11A1P12107 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL11A1P12107 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL11A1P12107 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
COL11A1P12107 THAP12P9-201ENST00000503971 2360 ntBASIC6.61□□□□□ -1.35
COL11A1P12107 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.61□□□□□ -1.35
COL11A1P12107 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC6.61□□□□□ -1.35
COL11A1P12107 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL11A1P12107 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL11A1P12107 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms