Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
KRT3P12035 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.34□□□□□ -1.39
KRT3P12035 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.34□□□□□ -1.39
KRT3P12035 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.34□□□□□ -1.39
KRT3P12035 AC073333.2-201ENST00000603589 769 ntBASIC6.34□□□□□ -1.39
KRT3P12035 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.34□□□□□ -1.39
KRT3P12035 FAM27E2-201ENST00000619668 403 ntBASIC6.34□□□□□ -1.39
KRT3P12035 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.34□□□□□ -1.39
KRT3P12035 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
KRT3P12035 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
KRT3P12035 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
KRT3P12035 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
KRT3P12035 MTCO1P28-201ENST00000574177 1528 ntBASIC6.34□□□□□ -1.39
KRT3P12035 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
KRT3P12035 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
KRT3P12035 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.4
KRT3P12035 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
KRT3P12035 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
KRT3P12035 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
KRT3P12035 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
KRT3P12035 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
KRT3P12035 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
KRT3P12035 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
KRT3P12035 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
KRT3P12035 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.33□□□□□ -1.4
KRT3P12035 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.33□□□□□ -1.4
KRT3P12035 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
KRT3P12035 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
KRT3P12035 SNORD1C-201ENST00000363315 78 ntBASIC6.33□□□□□ -1.4
KRT3P12035 GNG5P2-201ENST00000372054 207 ntBASIC6.33□□□□□ -1.4
KRT3P12035 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.33□□□□□ -1.4
KRT3P12035 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.33□□□□□ -1.4
KRT3P12035 RPS26P38-201ENST00000414476 348 ntBASIC6.33□□□□□ -1.4
KRT3P12035 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.33□□□□□ -1.4
KRT3P12035 AC023141.3-201ENST00000436698 278 ntBASIC6.33□□□□□ -1.4
KRT3P12035 RPL5P7-201ENST00000444235 813 ntBASIC6.33□□□□□ -1.4
KRT3P12035 TIMM8BP2-201ENST00000445940 251 ntBASIC6.33□□□□□ -1.4
KRT3P12035 AC091874.2-201ENST00000505889 720 ntBASIC6.33□□□□□ -1.4
KRT3P12035 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.33□□□□□ -1.4
KRT3P12035 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.33□□□□□ -1.4
KRT3P12035 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.33□□□□□ -1.4
KRT3P12035 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.33□□□□□ -1.4
KRT3P12035 OR7E158P-201ENST00000524483 910 ntBASIC6.33□□□□□ -1.4
KRT3P12035 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
KRT3P12035 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.33□□□□□ -1.4
KRT3P12035 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.33□□□□□ -1.4
KRT3P12035 AL031658.2-201ENST00000616850 651 ntBASIC6.33□□□□□ -1.4
KRT3P12035 AC048341.3-201ENST00000619323 491 ntBASIC6.33□□□□□ -1.4
KRT3P12035 AC069542.2-201ENST00000624816 216 ntBASIC6.33□□□□□ -1.4
KRT3P12035 AL357562.1-201ENST00000624911 609 ntBASIC6.33□□□□□ -1.4
KRT3P12035 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.33□□□□□ -1.4
KRT3P12035 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.33□□□□□ -1.4
KRT3P12035 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
KRT3P12035 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
KRT3P12035 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
KRT3P12035 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.32□□□□□ -1.4
KRT3P12035 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRT3P12035 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
KRT3P12035 PPBPP2-201ENST00000513150 1362 ntBASIC6.32□□□□□ -1.4
KRT3P12035 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.32□□□□□ -1.4
KRT3P12035 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.32□□□□□ -1.4
KRT3P12035 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
KRT3P12035 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRT3P12035 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.32□□□□□ -1.4
KRT3P12035 AC090181.3-201ENST00000624777 1514 ntBASIC6.32□□□□□ -1.4
KRT3P12035 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRT3P12035 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.32□□□□□ -1.4
KRT3P12035 RN7SKP171-201ENST00000364417 303 ntBASIC6.32□□□□□ -1.4
KRT3P12035 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRT3P12035 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
KRT3P12035 GCNT1P4-201ENST00000404096 329 ntBASIC6.32□□□□□ -1.4
KRT3P12035 AC245096.1-201ENST00000413104 546 ntBASIC6.32□□□□□ -1.4
KRT3P12035 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.32□□□□□ -1.4
KRT3P12035 NMD3P2-201ENST00000421815 761 ntBASIC6.32□□□□□ -1.4
KRT3P12035 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.32□□□□□ -1.4
KRT3P12035 BTG3P1-201ENST00000435859 716 ntBASIC6.32□□□□□ -1.4
KRT3P12035 AL353662.1-201ENST00000439099 327 ntBASIC6.32□□□□□ -1.4
KRT3P12035 OR52I1-201ENST00000450052 1050 ntBASIC6.32□□□□□ -1.4
KRT3P12035 SDC4P-201ENST00000453285 601 ntBASIC6.32□□□□□ -1.4
KRT3P12035 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.32□□□□□ -1.4
KRT3P12035 AC018797.1-201ENST00000510791 255 ntBASIC6.32□□□□□ -1.4
KRT3P12035 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.32□□□□□ -1.4
KRT3P12035 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.32□□□□□ -1.4
KRT3P12035 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.32□□□□□ -1.4
KRT3P12035 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.32□□□□□ -1.4
KRT3P12035 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.32□□□□□ -1.4
KRT3P12035 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.32□□□□□ -1.4
KRT3P12035 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.32□□□□□ -1.4
KRT3P12035 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC6.32□□□□□ -1.4
KRT3P12035 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.32□□□□□ -1.4
KRT3P12035 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.32□□□□□ -1.4
KRT3P12035 uc_338.26-201ENST00000612659 160 ntBASIC6.32□□□□□ -1.4
KRT3P12035 AC244100.4-201ENST00000617747 388 ntBASIC6.32□□□□□ -1.4
KRT3P12035 AP001153.1-201ENST00000641024 338 ntBASIC6.32□□□□□ -1.4
KRT3P12035 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
KRT3P12035 THAP12P9-201ENST00000503971 2360 ntBASIC6.32□□□□□ -1.4
KRT3P12035 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
KRT3P12035 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.32□□□□□ -1.4
KRT3P12035 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.32□□□□□ -1.4
KRT3P12035 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms