Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RAB40ALP0C0E4 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.86□□□□□ -1.47
RAB40ALP0C0E4 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 AL133243.2-201ENST00000610331 1621 ntBASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 AL929601.4-201ENST00000613011 1341 ntBASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 Y_RNA.62-201ENST00000362840 99 ntBASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 RNU1-134P-201ENST00000362935 165 ntBASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 RNA5SP478-201ENST00000364657 115 ntBASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 RNA5SP156-201ENST00000410250 110 ntBASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 U3.43-201ENST00000410734 213 ntBASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 SLC20A1P1-201ENST00000413906 956 ntBASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 NAP1L4P2-201ENST00000425958 899 ntBASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 RSL24D1P2-201ENST00000445584 366 ntBASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 SNX18P26-201ENST00000458433 740 ntBASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 AL158068.1-201ENST00000506116 616 ntBASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 RN7SKP67-201ENST00000515905 235 ntBASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 RNA5SP434-201ENST00000516647 121 ntBASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 AC090236.2-201ENST00000587933 1101 ntBASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 AC068768.2-201ENST00000602352 343 ntBASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 AC073333.2-201ENST00000603589 769 ntBASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 AL591167.1-201ENST00000607321 456 ntBASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 AL137246.2-201ENST00000613439 662 ntBASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 RFPL4AP6-201ENST00000616792 846 ntBASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.85□□□□□ -1.47
RAB40ALP0C0E4 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 AC018717.1-201ENST00000457712 1505 ntBASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 AL451046.1-201ENST00000406097 534 ntBASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 RPL34P27-201ENST00000428810 349 ntBASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 SEPT14P12-201ENST00000442280 560 ntBASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 TRIM60P16-201ENST00000444048 694 ntBASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 OR6C72P-201ENST00000451403 892 ntBASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.84□□□□□ -1.47
RAB40ALP0C0E4 RANP2-201ENST00000456833 229 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms