Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TPM1P09493 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.56□□□□□ -1.36
TPM1P09493 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TPM1P09493 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TPM1P09493 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TPM1P09493 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TPM1P09493 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.56□□□□□ -1.36
TPM1P09493 RNA5SP156-201ENST00000410250 110 ntBASIC6.56□□□□□ -1.36
TPM1P09493 AL360013.1-201ENST00000419031 858 ntBASIC6.56□□□□□ -1.36
TPM1P09493 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC6.56□□□□□ -1.36
TPM1P09493 OSTCP4-201ENST00000424397 449 ntBASIC6.56□□□□□ -1.36
TPM1P09493 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.56□□□□□ -1.36
TPM1P09493 CXCR2P1-202ENST00000443392 1074 ntBASIC6.56□□□□□ -1.36
TPM1P09493 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
TPM1P09493 AC073072.2-201ENST00000447425 348 ntBASIC6.56□□□□□ -1.36
TPM1P09493 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.56□□□□□ -1.36
TPM1P09493 AL354872.1-201ENST00000456361 967 ntBASIC6.56□□□□□ -1.36
TPM1P09493 PDCL3P4-201ENST00000489621 720 ntBASIC6.56□□□□□ -1.36
TPM1P09493 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TPM1P09493 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.56□□□□□ -1.36
TPM1P09493 AC134698.1-201ENST00000511619 643 ntBASIC6.56□□□□□ -1.36
TPM1P09493 AC084851.2-201ENST00000530377 364 ntBASIC6.56□□□□□ -1.36
TPM1P09493 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.56□□□□□ -1.36
TPM1P09493 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.56□□□□□ -1.36
TPM1P09493 RPL41P2-201ENST00000544920 409 ntBASIC6.56□□□□□ -1.36
TPM1P09493 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.56□□□□□ -1.36
TPM1P09493 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.56□□□□□ -1.36
TPM1P09493 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
TPM1P09493 NIFKP4-201ENST00000567275 1192 ntBASIC6.56□□□□□ -1.36
TPM1P09493 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.56□□□□□ -1.36
TPM1P09493 AC091304.5-201ENST00000568969 158 ntBASIC6.56□□□□□ -1.36
TPM1P09493 AC068408.1-201ENST00000577406 1144 ntBASIC6.56□□□□□ -1.36
TPM1P09493 AC027216.1-201ENST00000577726 685 ntBASIC6.56□□□□□ -1.36
TPM1P09493 AC099777.1-201ENST00000603779 1070 ntBASIC6.56□□□□□ -1.36
TPM1P09493 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TPM1P09493 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.56□□□□□ -1.36
TPM1P09493 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
TPM1P09493 AC096708.4-201ENST00000620563 552 ntBASIC6.56□□□□□ -1.36
TPM1P09493 MIR6503-201ENST00000622884 86 ntBASIC6.56□□□□□ -1.36
TPM1P09493 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TPM1P09493 AL133243.2-201ENST00000610331 1621 ntBASIC6.56□□□□□ -1.36
TPM1P09493 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TPM1P09493 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TPM1P09493 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TPM1P09493 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TPM1P09493 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TPM1P09493 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TPM1P09493 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.56□□□□□ -1.36
TPM1P09493 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TPM1P09493 AL137058.3-201ENST00000624531 3099 ntBASIC6.56□□□□□ -1.36
TPM1P09493 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.56□□□□□ -1.36
TPM1P09493 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.55□□□□□ -1.36
TPM1P09493 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
TPM1P09493 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TPM1P09493 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.55□□□□□ -1.36
TPM1P09493 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TPM1P09493 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
TPM1P09493 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
TPM1P09493 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
TPM1P09493 AC003045.1-201ENST00000398779 713 ntBASIC6.55□□□□□ -1.36
TPM1P09493 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.55□□□□□ -1.36
TPM1P09493 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.55□□□□□ -1.36
TPM1P09493 CYCSP51-201ENST00000443545 318 ntBASIC6.55□□□□□ -1.36
TPM1P09493 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.55□□□□□ -1.36
TPM1P09493 OR2L9P-201ENST00000444456 913 ntBASIC6.55□□□□□ -1.36
TPM1P09493 COX4I1P2-201ENST00000447446 547 ntBASIC6.55□□□□□ -1.36
TPM1P09493 SLAMF6P1-201ENST00000451067 602 ntBASIC6.55□□□□□ -1.36
TPM1P09493 RN7SL655P-201ENST00000486087 298 ntBASIC6.55□□□□□ -1.36
TPM1P09493 AC083795.1-201ENST00000491760 320 ntBASIC6.55□□□□□ -1.36
TPM1P09493 NPM1P21-201ENST00000513394 762 ntBASIC6.55□□□□□ -1.36
TPM1P09493 NATP-201ENST00000523491 878 ntBASIC6.55□□□□□ -1.36
TPM1P09493 AC135983.3-201ENST00000528049 1226 ntBASIC6.55□□□□□ -1.36
TPM1P09493 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.55□□□□□ -1.36
TPM1P09493 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC6.55□□□□□ -1.36
TPM1P09493 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.55□□□□□ -1.36
TPM1P09493 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.55□□□□□ -1.36
TPM1P09493 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.55□□□□□ -1.36
TPM1P09493 MED31-202ENST00000574128 619 ntTSL 3 BASIC6.55□□□□□ -1.36
TPM1P09493 MIR378H-201ENST00000579966 83 ntBASIC6.55□□□□□ -1.36
TPM1P09493 AC036176.3-201ENST00000602456 418 ntBASIC6.55□□□□□ -1.36
TPM1P09493 AL133481.2-203ENST00000607558 139 ntBASIC6.55□□□□□ -1.36
TPM1P09493 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.55□□□□□ -1.36
TPM1P09493 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TPM1P09493 AC130304.1-201ENST00000622942 2385 ntBASIC6.55□□□□□ -1.36
TPM1P09493 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TPM1P09493 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
TPM1P09493 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
TPM1P09493 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.55□□□□□ -1.36
TPM1P09493 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TPM1P09493 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TPM1P09493 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
TPM1P09493 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.54□□□□□ -1.36
TPM1P09493 AC010266.2-201ENST00000564741 3255 ntBASIC6.54□□□□□ -1.36
TPM1P09493 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TPM1P09493 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.54□□□□□ -1.36
TPM1P09493 CASC19-246ENST00000641625 1606 ntBASIC6.54□□□□□ -1.36
TPM1P09493 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.54□□□□□ -1.36
TPM1P09493 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.54□□□□□ -1.36
TPM1P09493 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TPM1P09493 AC015689.2-201ENST00000528172 1738 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms