Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXC4P09017 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.91□□□□□ -1.46
HOXC4P09017 AC090651.1-201ENST00000567865 634 ntBASIC5.91□□□□□ -1.46
HOXC4P09017 MIR3614-201ENST00000581261 86 ntBASIC5.91□□□□□ -1.46
HOXC4P09017 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXC4P09017 AC027334.1-201ENST00000603257 310 ntBASIC5.91□□□□□ -1.46
HOXC4P09017 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXC4P09017 AL137246.2-201ENST00000613439 662 ntBASIC5.91□□□□□ -1.46
HOXC4P09017 AP003789.1-201ENST00000617737 605 ntBASIC5.91□□□□□ -1.46
HOXC4P09017 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXC4P09017 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC4P09017 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXC4P09017 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HOXC4P09017 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC4P09017 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC4P09017 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.91□□□□□ -1.46
HOXC4P09017 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXC4P09017 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXC4P09017 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.91□□□□□ -1.46
HOXC4P09017 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXC4P09017 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC5.91□□□□□ -1.46
HOXC4P09017 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC4P09017 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HOXC4P09017 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.9□□□□□ -1.46
HOXC4P09017 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HOXC4P09017 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
HOXC4P09017 OR13C1P-202ENST00000641378 2919 ntBASIC5.9□□□□□ -1.46
HOXC4P09017 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
HOXC4P09017 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC5.9□□□□□ -1.46
HOXC4P09017 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
HOXC4P09017 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.9□□□□□ -1.46
HOXC4P09017 OR52B3P-201ENST00000314715 928 ntBASIC5.9□□□□□ -1.46
HOXC4P09017 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.9□□□□□ -1.46
HOXC4P09017 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HOXC4P09017 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
HOXC4P09017 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HOXC4P09017 RN7SKP77-201ENST00000363261 353 ntBASIC5.9□□□□□ -1.46
HOXC4P09017 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.9□□□□□ -1.46
HOXC4P09017 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.9□□□□□ -1.46
HOXC4P09017 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.9□□□□□ -1.46
HOXC4P09017 AC116036.1-201ENST00000412199 367 ntBASIC5.9□□□□□ -1.46
HOXC4P09017 AL354890.1-201ENST00000413730 346 ntBASIC5.9□□□□□ -1.46
HOXC4P09017 EEF1B2P8-201ENST00000414101 671 ntBASIC5.9□□□□□ -1.46
HOXC4P09017 AC104843.2-201ENST00000427666 297 ntBASIC5.9□□□□□ -1.46
HOXC4P09017 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.9□□□□□ -1.46
HOXC4P09017 HSPE1P27-201ENST00000430808 296 ntBASIC5.9□□□□□ -1.46
HOXC4P09017 AL512637.1-201ENST00000439523 1231 ntBASIC5.9□□□□□ -1.46
HOXC4P09017 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.9□□□□□ -1.46
HOXC4P09017 RPS7P3-201ENST00000443360 580 ntBASIC5.9□□□□□ -1.46
HOXC4P09017 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
HOXC4P09017 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.9□□□□□ -1.46
HOXC4P09017 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.9□□□□□ -1.46
HOXC4P09017 AC104164.1-201ENST00000460282 590 ntBASIC5.9□□□□□ -1.46
HOXC4P09017 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.9□□□□□ -1.46
HOXC4P09017 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.9□□□□□ -1.46
HOXC4P09017 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.9□□□□□ -1.46
HOXC4P09017 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.9□□□□□ -1.46
HOXC4P09017 AC022826.1-201ENST00000519383 805 ntBASIC5.9□□□□□ -1.46
HOXC4P09017 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HOXC4P09017 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.9□□□□□ -1.46
HOXC4P09017 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.9□□□□□ -1.46
HOXC4P09017 AC079600.1-201ENST00000550326 297 ntBASIC5.9□□□□□ -1.46
HOXC4P09017 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.9□□□□□ -1.46
HOXC4P09017 AC007494.1-201ENST00000562293 760 ntBASIC5.9□□□□□ -1.46
HOXC4P09017 ZNF322P1-201ENST00000568013 1209 ntBASIC5.9□□□□□ -1.46
HOXC4P09017 AC092121.1-201ENST00000569452 202 ntBASIC5.9□□□□□ -1.46
HOXC4P09017 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.9□□□□□ -1.46
HOXC4P09017 AC137695.1-201ENST00000604126 489 ntBASIC5.9□□□□□ -1.46
HOXC4P09017 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.9□□□□□ -1.46
HOXC4P09017 AC145423.1-201ENST00000605712 336 ntBASIC5.9□□□□□ -1.46
HOXC4P09017 AC026124.2-201ENST00000621847 656 ntBASIC5.9□□□□□ -1.46
HOXC4P09017 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.9□□□□□ -1.46
HOXC4P09017 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
HOXC4P09017 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HOXC4P09017 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.47
HOXC4P09017 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.9□□□□□ -1.47
HOXC4P09017 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HOXC4P09017 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HOXC4P09017 AC006511.3-201ENST00000624929 1783 ntBASIC5.9□□□□□ -1.47
HOXC4P09017 AC022034.1-201ENST00000512867 2156 ntBASIC5.9□□□□□ -1.47
HOXC4P09017 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HOXC4P09017 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
HOXC4P09017 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
HOXC4P09017 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
HOXC4P09017 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.9□□□□□ -1.47
HOXC4P09017 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HOXC4P09017 MR1-209ENST00000617803 7584 ntTSL 5 BASIC5.89□□□□□ -1.47
HOXC4P09017 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.89□□□□□ -1.47
HOXC4P09017 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
HOXC4P09017 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.89□□□□□ -1.47
HOXC4P09017 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HOXC4P09017 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
HOXC4P09017 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HOXC4P09017 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.89□□□□□ -1.47
HOXC4P09017 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.89□□□□□ -1.47
HOXC4P09017 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HOXC4P09017 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
HOXC4P09017 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HOXC4P09017 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HOXC4P09017 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 412.6 ms