Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.05□□□□□ -1.6
CD74P04233 RNA5SP418-201ENST00000515951 117 ntBASIC5.05□□□□□ -1.6
CD74P04233 Y_RNA.710-201ENST00000516975 110 ntBASIC5.05□□□□□ -1.6
CD74P04233 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CD74P04233 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC5.05□□□□□ -1.6
CD74P04233 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.05□□□□□ -1.6
CD74P04233 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.05□□□□□ -1.6
CD74P04233 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.05□□□□□ -1.6
CD74P04233 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.05□□□□□ -1.6
CD74P04233 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.05□□□□□ -1.6
CD74P04233 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.05□□□□□ -1.6
CD74P04233 AL513327.3-201ENST00000602618 469 ntBASIC5.05□□□□□ -1.6
CD74P04233 NDUFB9P1-201ENST00000604683 510 ntBASIC5.05□□□□□ -1.6
CD74P04233 AC005355.2-201ENST00000625064 484 ntBASIC5.05□□□□□ -1.6
CD74P04233 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.05□□□□□ -1.6
CD74P04233 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC5.05□□□□□ -1.6
CD74P04233 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CD74P04233 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CD74P04233 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CD74P04233 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.05□□□□□ -1.6
CD74P04233 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
CD74P04233 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.05□□□□□ -1.6
CD74P04233 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.05□□□□□ -1.6
CD74P04233 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
CD74P04233 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CD74P04233 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CD74P04233 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD74P04233 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.04□□□□□ -1.6
CD74P04233 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CD74P04233 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CD74P04233 OR5M2P-202ENST00000641241 4242 ntBASIC5.04□□□□□ -1.6
CD74P04233 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.04□□□□□ -1.6
CD74P04233 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD74P04233 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.04□□□□□ -1.6
CD74P04233 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD74P04233 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD74P04233 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CD74P04233 AC010266.2-201ENST00000564741 3255 ntBASIC5.04□□□□□ -1.6
CD74P04233 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CD74P04233 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CD74P04233 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.04□□□□□ -1.6
CD74P04233 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.04□□□□□ -1.6
CD74P04233 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CD74P04233 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CD74P04233 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.04□□□□□ -1.6
CD74P04233 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD74P04233 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CD74P04233 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD74P04233 RNA5SP375-201ENST00000362975 119 ntBASIC5.04□□□□□ -1.6
CD74P04233 TRAV35-201ENST00000390462 330 ntBASIC5.04□□□□□ -1.6
CD74P04233 OR52N3P-201ENST00000413417 934 ntBASIC5.04□□□□□ -1.6
CD74P04233 CDC42P6-201ENST00000421246 576 ntBASIC5.04□□□□□ -1.6
CD74P04233 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.04□□□□□ -1.6
CD74P04233 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.04□□□□□ -1.6
CD74P04233 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.04□□□□□ -1.6
CD74P04233 EMC3-AS1-205ENST00000438698 534 ntBASIC5.04□□□□□ -1.6
CD74P04233 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.04□□□□□ -1.6
CD74P04233 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.04□□□□□ -1.6
CD74P04233 AC073476.1-201ENST00000452854 407 ntBASIC5.04□□□□□ -1.6
CD74P04233 RARRES2P3-201ENST00000457739 473 ntBASIC5.04□□□□□ -1.6
CD74P04233 RN7SKP198-201ENST00000459286 306 ntBASIC5.04□□□□□ -1.6
CD74P04233 AL603882.1-201ENST00000463059 681 ntBASIC5.04□□□□□ -1.6
CD74P04233 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CD74P04233 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.04□□□□□ -1.6
CD74P04233 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CD74P04233 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.04□□□□□ -1.6
CD74P04233 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.04□□□□□ -1.6
CD74P04233 AC138832.1-201ENST00000522871 556 ntBASIC5.04□□□□□ -1.6
CD74P04233 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.04□□□□□ -1.6
CD74P04233 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.04□□□□□ -1.6
CD74P04233 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.04□□□□□ -1.6
CD74P04233 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.04□□□□□ -1.6
CD74P04233 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.04□□□□□ -1.6
CD74P04233 AC027796.1-201ENST00000575593 512 ntBASIC5.04□□□□□ -1.6
CD74P04233 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.04□□□□□ -1.6
CD74P04233 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC5.04□□□□□ -1.6
CD74P04233 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.04□□□□□ -1.6
CD74P04233 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.04□□□□□ -1.6
CD74P04233 AC007786.3-201ENST00000615154 596 ntBASIC5.04□□□□□ -1.6
CD74P04233 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.04□□□□□ -1.6
CD74P04233 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CD74P04233 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.04□□□□□ -1.6
CD74P04233 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.04□□□□□ -1.6
CD74P04233 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
CD74P04233 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD74P04233 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.04□□□□□ -1.6
CD74P04233 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CD74P04233 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD74P04233 AC007842.1-201ENST00000597336 2039 ntBASIC5.04□□□□□ -1.6
CD74P04233 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.04□□□□□ -1.6
CD74P04233 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
CD74P04233 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CD74P04233 AC005261.6-201ENST00000623072 1387 ntBASIC5.04□□□□□ -1.6
CD74P04233 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CD74P04233 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.03□□□□□ -1.6
CD74P04233 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.03□□□□□ -1.6
CD74P04233 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CD74P04233 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CD74P04233 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CD74P04233 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms