Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.55□□□□□ -1.36
VTNP04004 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VTNP04004 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
VTNP04004 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.55□□□□□ -1.36
VTNP04004 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VTNP04004 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VTNP04004 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VTNP04004 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.55□□□□□ -1.36
VTNP04004 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VTNP04004 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VTNP04004 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VTNP04004 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VTNP04004 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
VTNP04004 RPS3AP2-201ENST00000407190 754 ntBASIC6.55□□□□□ -1.36
VTNP04004 AC007568.1-201ENST00000422912 471 ntBASIC6.55□□□□□ -1.36
VTNP04004 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.55□□□□□ -1.36
VTNP04004 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.55□□□□□ -1.36
VTNP04004 AC242426.1-201ENST00000435270 960 ntBASIC6.55□□□□□ -1.36
VTNP04004 SDC4P-201ENST00000453285 601 ntBASIC6.55□□□□□ -1.36
VTNP04004 AC093166.4-201ENST00000457867 318 ntBASIC6.55□□□□□ -1.36
VTNP04004 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VTNP04004 CCDC11P1-201ENST00000503137 1162 ntBASIC6.55□□□□□ -1.36
VTNP04004 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.55□□□□□ -1.36
VTNP04004 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.55□□□□□ -1.36
VTNP04004 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.55□□□□□ -1.36
VTNP04004 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC6.55□□□□□ -1.36
VTNP04004 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.55□□□□□ -1.36
VTNP04004 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VTNP04004 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.55□□□□□ -1.36
VTNP04004 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC6.55□□□□□ -1.36
VTNP04004 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.55□□□□□ -1.36
VTNP04004 AC027334.1-201ENST00000603257 310 ntBASIC6.55□□□□□ -1.36
VTNP04004 MIR6886-201ENST00000619864 61 ntBASIC6.55□□□□□ -1.36
VTNP04004 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.55□□□□□ -1.36
VTNP04004 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
VTNP04004 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.55□□□□□ -1.36
VTNP04004 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
VTNP04004 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
VTNP04004 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VTNP04004 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
VTNP04004 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
VTNP04004 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.55□□□□□ -1.36
VTNP04004 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
VTNP04004 AL161901.1-201ENST00000624954 3425 ntBASIC6.54□□□□□ -1.36
VTNP04004 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
VTNP04004 AL121768.1-201ENST00000613917 2544 ntBASIC6.54□□□□□ -1.36
VTNP04004 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
VTNP04004 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.54□□□□□ -1.36
VTNP04004 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
VTNP04004 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
VTNP04004 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
VTNP04004 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.54□□□□□ -1.36
VTNP04004 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
VTNP04004 MIR375-201ENST00000362103 64 ntBASIC6.54□□□□□ -1.36
VTNP04004 MIR323A-201ENST00000362199 86 ntBASIC6.54□□□□□ -1.36
VTNP04004 SNORD8-201ENST00000363915 110 ntBASIC6.54□□□□□ -1.36
VTNP04004 OR7E101P-201ENST00000400428 513 ntBASIC6.54□□□□□ -1.36
VTNP04004 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.54□□□□□ -1.36
VTNP04004 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.54□□□□□ -1.36
VTNP04004 RPSAP41-201ENST00000439695 860 ntBASIC6.54□□□□□ -1.36
VTNP04004 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.54□□□□□ -1.36
VTNP04004 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
VTNP04004 RN7SL717P-201ENST00000478343 297 ntBASIC6.54□□□□□ -1.36
VTNP04004 AC093719.1-201ENST00000480427 441 ntBASIC6.54□□□□□ -1.36
VTNP04004 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
VTNP04004 AC124945.1-201ENST00000485133 188 ntBASIC6.54□□□□□ -1.36
VTNP04004 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.54□□□□□ -1.36
VTNP04004 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.54□□□□□ -1.36
VTNP04004 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.54□□□□□ -1.36
VTNP04004 SNORA70.20-201ENST00000516848 126 ntBASIC6.54□□□□□ -1.36
VTNP04004 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.54□□□□□ -1.36
VTNP04004 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.54□□□□□ -1.36
VTNP04004 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.54□□□□□ -1.36
VTNP04004 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.54□□□□□ -1.36
VTNP04004 AC015802.2-201ENST00000589690 189 ntBASIC6.54□□□□□ -1.36
VTNP04004 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.54□□□□□ -1.36
VTNP04004 AL049840.6-202ENST00000603373 279 ntBASIC6.54□□□□□ -1.36
VTNP04004 CYCSP1-201ENST00000604815 315 ntBASIC6.54□□□□□ -1.36
VTNP04004 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.54□□□□□ -1.36
VTNP04004 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.54□□□□□ -1.36
VTNP04004 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.54□□□□□ -1.36
VTNP04004 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.54□□□□□ -1.36
VTNP04004 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.54□□□□□ -1.36
VTNP04004 OR11H2-202ENST00000641517 1085 ntBASIC6.54□□□□□ -1.36
VTNP04004 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
VTNP04004 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.54□□□□□ -1.36
VTNP04004 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.54□□□□□ -1.36
VTNP04004 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
VTNP04004 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.54□□□□□ -1.36
VTNP04004 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VTNP04004 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.53□□□□□ -1.36
VTNP04004 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.53□□□□□ -1.36
VTNP04004 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.53□□□□□ -1.36
VTNP04004 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
VTNP04004 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
VTNP04004 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
VTNP04004 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
VTNP04004 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
VTNP04004 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VTNP04004 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms