Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
CHRNA1P02708 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CHRNA1P02708 MIR375-201ENST00000362103 64 ntBASIC6.6□□□□□ -1.35
CHRNA1P02708 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
CHRNA1P02708 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CHRNA1P02708 AL121776.1-201ENST00000429337 372 ntBASIC6.6□□□□□ -1.35
CHRNA1P02708 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.6□□□□□ -1.35
CHRNA1P02708 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.6□□□□□ -1.35
CHRNA1P02708 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.6□□□□□ -1.35
CHRNA1P02708 RNA5SP116-201ENST00000516132 98 ntBASIC6.6□□□□□ -1.35
CHRNA1P02708 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.6□□□□□ -1.35
CHRNA1P02708 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.6□□□□□ -1.35
CHRNA1P02708 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.6□□□□□ -1.35
CHRNA1P02708 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CHRNA1P02708 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CHRNA1P02708 OR6M2P-201ENST00000529831 871 ntBASIC6.6□□□□□ -1.35
CHRNA1P02708 MIR3176-201ENST00000582210 90 ntBASIC6.6□□□□□ -1.35
CHRNA1P02708 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.6□□□□□ -1.35
CHRNA1P02708 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.6□□□□□ -1.35
CHRNA1P02708 MIR193BHG-214ENST00000641765 509 ntBASIC6.6□□□□□ -1.35
CHRNA1P02708 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CHRNA1P02708 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
CHRNA1P02708 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
CHRNA1P02708 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.6□□□□□ -1.35
CHRNA1P02708 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CHRNA1P02708 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CHRNA1P02708 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CHRNA1P02708 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
CHRNA1P02708 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.6□□□□□ -1.35
CHRNA1P02708 AC005261.2-201ENST00000593427 4258 ntBASIC6.6□□□□□ -1.35
CHRNA1P02708 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.6□□□□□ -1.35
CHRNA1P02708 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
CHRNA1P02708 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.6□□□□□ -1.35
CHRNA1P02708 AC096921.2-201ENST00000561507 1916 ntBASIC6.6□□□□□ -1.35
CHRNA1P02708 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CHRNA1P02708 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CHRNA1P02708 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CHRNA1P02708 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.59□□□□□ -1.35
CHRNA1P02708 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
CHRNA1P02708 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CHRNA1P02708 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
CHRNA1P02708 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
CHRNA1P02708 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CHRNA1P02708 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
CHRNA1P02708 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.59□□□□□ -1.35
CHRNA1P02708 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CHRNA1P02708 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.59□□□□□ -1.35
CHRNA1P02708 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.59□□□□□ -1.35
CHRNA1P02708 BX510359.3-201ENST00000422168 306 ntBASIC6.59□□□□□ -1.35
CHRNA1P02708 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.59□□□□□ -1.35
CHRNA1P02708 RPS26P39-201ENST00000469206 341 ntBASIC6.59□□□□□ -1.35
CHRNA1P02708 AC083795.1-201ENST00000491760 320 ntBASIC6.59□□□□□ -1.35
CHRNA1P02708 RPS4XP14-201ENST00000493072 781 ntBASIC6.59□□□□□ -1.35
CHRNA1P02708 AL136038.1-201ENST00000497246 351 ntBASIC6.59□□□□□ -1.35
CHRNA1P02708 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.59□□□□□ -1.35
CHRNA1P02708 CYCSP22-201ENST00000517555 339 ntBASIC6.59□□□□□ -1.35
CHRNA1P02708 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.59□□□□□ -1.35
CHRNA1P02708 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.59□□□□□ -1.35
CHRNA1P02708 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.59□□□□□ -1.35
CHRNA1P02708 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.59□□□□□ -1.35
CHRNA1P02708 AC020916.2-201ENST00000591242 360 ntBASIC6.59□□□□□ -1.35
CHRNA1P02708 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CHRNA1P02708 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.59□□□□□ -1.35
CHRNA1P02708 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CHRNA1P02708 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
CHRNA1P02708 SHQ1P1-201ENST00000437111 1544 ntBASIC6.59□□□□□ -1.35
CHRNA1P02708 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CHRNA1P02708 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CHRNA1P02708 AL391261.1-201ENST00000555712 1479 ntBASIC6.59□□□□□ -1.36
CHRNA1P02708 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
CHRNA1P02708 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.59□□□□□ -1.36
CHRNA1P02708 AC090220.1-201ENST00000593078 1699 ntBASIC6.58□□□□□ -1.36
CHRNA1P02708 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
CHRNA1P02708 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CHRNA1P02708 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CHRNA1P02708 AC005618.1-201ENST00000606901 3148 ntBASIC6.58□□□□□ -1.36
CHRNA1P02708 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CHRNA1P02708 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CHRNA1P02708 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CHRNA1P02708 GTF3AP1-201ENST00000416942 1004 ntBASIC6.58□□□□□ -1.36
CHRNA1P02708 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.58□□□□□ -1.36
CHRNA1P02708 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CHRNA1P02708 CT45A11P-201ENST00000448043 1134 ntBASIC6.58□□□□□ -1.36
CHRNA1P02708 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.58□□□□□ -1.36
CHRNA1P02708 AC110749.1-201ENST00000462007 357 ntBASIC6.58□□□□□ -1.36
CHRNA1P02708 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CHRNA1P02708 RN7SL57P-201ENST00000493687 290 ntBASIC6.58□□□□□ -1.36
CHRNA1P02708 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.58□□□□□ -1.36
CHRNA1P02708 SNORA70.20-201ENST00000516848 126 ntBASIC6.58□□□□□ -1.36
CHRNA1P02708 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.58□□□□□ -1.36
CHRNA1P02708 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.58□□□□□ -1.36
CHRNA1P02708 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.58□□□□□ -1.36
CHRNA1P02708 AC022404.1-201ENST00000555320 273 ntBASIC6.58□□□□□ -1.36
CHRNA1P02708 AC010547.6-201ENST00000571789 193 ntBASIC6.58□□□□□ -1.36
CHRNA1P02708 MIR4301-201ENST00000577203 66 ntBASIC6.58□□□□□ -1.36
CHRNA1P02708 MIR4489-201ENST00000578869 62 ntBASIC6.58□□□□□ -1.36
CHRNA1P02708 NPM1P45-201ENST00000583151 559 ntBASIC6.58□□□□□ -1.36
CHRNA1P02708 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.58□□□□□ -1.36
CHRNA1P02708 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.58□□□□□ -1.36
CHRNA1P02708 AL021368.3-201ENST00000607119 578 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms