Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC8.71□□□□□ -1.02
RNF40O75150 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
RNF40O75150 AL080312.1-201ENST00000256654 824 ntBASIC8.71□□□□□ -1.02
RNF40O75150 SUGT1P3-201ENST00000304932 1051 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
RNF40O75150 FCAR-205ENST00000391723 754 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
RNF40O75150 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC8.71□□□□□ -1.02
RNF40O75150 RAB5CP1-201ENST00000395972 580 ntBASIC8.71□□□□□ -1.02
RNF40O75150 AL356432.1-201ENST00000405809 419 ntBASIC8.71□□□□□ -1.02
RNF40O75150 AL512422.1-201ENST00000407033 553 ntBASIC8.71□□□□□ -1.02
RNF40O75150 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC8.71□□□□□ -1.02
RNF40O75150 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC8.71□□□□□ -1.02
RNF40O75150 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC8.71□□□□□ -1.02
RNF40O75150 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
RNF40O75150 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC8.71□□□□□ -1.02
RNF40O75150 Z68871.1-201ENST00000426528 1133 ntTSL 5 BASIC8.71□□□□□ -1.02
RNF40O75150 RPS25P9-201ENST00000435591 252 ntBASIC8.71□□□□□ -1.02
RNF40O75150 PDSS1P2-201ENST00000449397 678 ntBASIC8.71□□□□□ -1.02
RNF40O75150 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC8.71□□□□□ -1.02
RNF40O75150 RPS29P16-201ENST00000452798 171 ntBASIC8.71□□□□□ -1.02
RNF40O75150 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC8.71□□□□□ -1.02
RNF40O75150 OFD1P4Y-201ENST00000455273 1179 ntBASIC8.71□□□□□ -1.02
RNF40O75150 AC233279.1-201ENST00000455300 423 ntBASIC8.71□□□□□ -1.02
RNF40O75150 AP000797.1-201ENST00000478870 387 ntBASIC8.71□□□□□ -1.02
RNF40O75150 ACTG1P13-201ENST00000486987 1043 ntBASIC8.71□□□□□ -1.02
RNF40O75150 MYADML-203ENST00000491596 951 ntBASIC8.71□□□□□ -1.02
RNF40O75150 AC106800.2-201ENST00000514009 1103 ntBASIC8.71□□□□□ -1.02
RNF40O75150 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC8.71□□□□□ -1.02
RNF40O75150 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC8.71□□□□□ -1.02
RNF40O75150 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC8.71□□□□□ -1.02
RNF40O75150 AC078950.1-204ENST00000540635 523 ntTSL 3 BASIC8.71□□□□□ -1.02
RNF40O75150 AC243972.1-201ENST00000542992 570 ntTSL 4 BASIC8.71□□□□□ -1.02
RNF40O75150 HIF1A-AS2-201ENST00000554254 533 ntTSL 3 BASIC8.71□□□□□ -1.02
RNF40O75150 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC8.71□□□□□ -1.02
RNF40O75150 AC087645.1-201ENST00000588528 291 ntBASIC8.71□□□□□ -1.02
RNF40O75150 FXYD1-205ENST00000588607 619 ntAPPRIS P1 TSL 3 BASIC8.71□□□□□ -1.02
RNF40O75150 BNIP3P8-201ENST00000597863 560 ntBASIC8.71□□□□□ -1.02
RNF40O75150 AL691432.1-202ENST00000597891 502 ntBASIC8.71□□□□□ -1.02
RNF40O75150 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
RNF40O75150 AC010680.4-201ENST00000605334 543 ntBASIC8.71□□□□□ -1.02
RNF40O75150 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC8.71□□□□□ -1.02
RNF40O75150 MLECP1-201ENST00000615893 709 ntBASIC8.71□□□□□ -1.02
RNF40O75150 7SK.10-201ENST00000621414 298 ntBASIC8.71□□□□□ -1.02
RNF40O75150 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
RNF40O75150 AP000648.2-201ENST00000624182 404 ntBASIC8.71□□□□□ -1.02
RNF40O75150 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC8.71□□□□□ -1.02
RNF40O75150 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
RNF40O75150 AC073055.1-201ENST00000456901 1621 ntBASIC8.71□□□□□ -1.02
RNF40O75150 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
RNF40O75150 CCDC83-202ENST00000342404 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
RNF40O75150 FO393401.2-201ENST00000422009 1307 ntTSL 5 BASIC8.71□□□□□ -1.02
RNF40O75150 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
RNF40O75150 CEACAM5-208ENST00000615021 1694 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
RNF40O75150 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
RNF40O75150 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
RNF40O75150 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC8.71□□□□□ -1.02
RNF40O75150 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
RNF40O75150 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
RNF40O75150 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
RNF40O75150 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
RNF40O75150 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
RNF40O75150 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
RNF40O75150 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC8.7□□□□□ -1.02
RNF40O75150 SAG-201ENST00000409110 1591 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
RNF40O75150 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
RNF40O75150 AC022150.4-201ENST00000598322 2848 ntBASIC8.7□□□□□ -1.02
RNF40O75150 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC8.7□□□□□ -1.02
RNF40O75150 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
RNF40O75150 GEMIN6-201ENST00000281950 3728 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
RNF40O75150 TAAR8-201ENST00000275200 1029 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
RNF40O75150 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
RNF40O75150 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
RNF40O75150 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
RNF40O75150 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
RNF40O75150 Y_RNA.72-201ENST00000362894 103 ntBASIC8.7□□□□□ -1.02
RNF40O75150 SNORA58.1-201ENST00000364133 136 ntBASIC8.7□□□□□ -1.02
RNF40O75150 RN7SKP76-201ENST00000364419 323 ntBASIC8.7□□□□□ -1.02
RNF40O75150 SNORD81.2-201ENST00000365153 76 ntBASIC8.7□□□□□ -1.02
RNF40O75150 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
RNF40O75150 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
RNF40O75150 GSTA9P-201ENST00000406231 611 ntBASIC8.7□□□□□ -1.02
RNF40O75150 OR4K12P-201ENST00000406538 961 ntBASIC8.7□□□□□ -1.02
RNF40O75150 IL6-206ENST00000407492 926 ntTSL 3 BASIC8.7□□□□□ -1.02
RNF40O75150 AP000357.1-201ENST00000409926 1165 ntBASIC8.7□□□□□ -1.02
RNF40O75150 SNORA73.3-201ENST00000410213 189 ntBASIC8.7□□□□□ -1.02
RNF40O75150 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC8.7□□□□□ -1.02
RNF40O75150 ZNF90P2-204ENST00000419323 1075 ntBASIC8.7□□□□□ -1.02
RNF40O75150 CCNT2-AS1-203ENST00000428857 677 ntTSL 4 BASIC8.7□□□□□ -1.02
RNF40O75150 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC8.7□□□□□ -1.02
RNF40O75150 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC8.7□□□□□ -1.02
RNF40O75150 HMGB1P5-202ENST00000451497 985 ntBASIC8.7□□□□□ -1.02
RNF40O75150 RPL23AP35-201ENST00000451906 501 ntBASIC8.7□□□□□ -1.02
RNF40O75150 RN7SL65P-201ENST00000485221 315 ntBASIC8.7□□□□□ -1.02
RNF40O75150 RPL15P21-201ENST00000495592 567 ntBASIC8.7□□□□□ -1.02
RNF40O75150 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC8.7□□□□□ -1.02
RNF40O75150 AC122718.2-201ENST00000505325 591 ntBASIC8.7□□□□□ -1.02
RNF40O75150 AC022447.3-201ENST00000506865 495 ntBASIC8.7□□□□□ -1.02
RNF40O75150 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC8.7□□□□□ -1.02
RNF40O75150 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC8.7□□□□□ -1.02
RNF40O75150 AC093677.1-201ENST00000514414 678 ntBASIC8.7□□□□□ -1.02
RNF40O75150 AC138866.1-201ENST00000514522 497 ntBASIC8.7□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms