Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SCN2BO60939 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SCN2BO60939 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SCN2BO60939 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
SCN2BO60939 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCN2BO60939 GTF2IP4-201ENST00000453092 2054 ntBASIC5.68□□□□□ -1.5
SCN2BO60939 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCN2BO60939 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SCN2BO60939 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.68□□□□□ -1.5
SCN2BO60939 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.68□□□□□ -1.5
SCN2BO60939 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SCN2BO60939 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCN2BO60939 AL034417.1-201ENST00000399343 800 ntBASIC5.68□□□□□ -1.5
SCN2BO60939 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.68□□□□□ -1.5
SCN2BO60939 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.68□□□□□ -1.5
SCN2BO60939 RPL35AP31-201ENST00000418340 337 ntBASIC5.68□□□□□ -1.5
SCN2BO60939 AC096632.2-201ENST00000438139 1239 ntBASIC5.68□□□□□ -1.5
SCN2BO60939 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SCN2BO60939 AC064862.5-201ENST00000440618 334 ntBASIC5.68□□□□□ -1.5
SCN2BO60939 AL645936.1-201ENST00000441979 518 ntBASIC5.68□□□□□ -1.5
SCN2BO60939 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.68□□□□□ -1.5
SCN2BO60939 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.68□□□□□ -1.5
SCN2BO60939 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SCN2BO60939 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.68□□□□□ -1.5
SCN2BO60939 CEACAMP11-201ENST00000455211 583 ntBASIC5.68□□□□□ -1.5
SCN2BO60939 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.68□□□□□ -1.5
SCN2BO60939 OSTCP1-201ENST00000455507 450 ntBASIC5.68□□□□□ -1.5
SCN2BO60939 RPS7P10-201ENST00000464254 603 ntBASIC5.68□□□□□ -1.5
SCN2BO60939 AC093719.1-201ENST00000480427 441 ntBASIC5.68□□□□□ -1.5
SCN2BO60939 AC093815.1-201ENST00000508637 280 ntBASIC5.68□□□□□ -1.5
SCN2BO60939 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.68□□□□□ -1.5
SCN2BO60939 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SCN2BO60939 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.68□□□□□ -1.5
SCN2BO60939 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.68□□□□□ -1.5
SCN2BO60939 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.68□□□□□ -1.5
SCN2BO60939 AP005136.2-201ENST00000583253 1049 ntBASIC5.68□□□□□ -1.5
SCN2BO60939 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.68□□□□□ -1.5
SCN2BO60939 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCN2BO60939 AC125494.2-201ENST00000602431 657 ntBASIC5.68□□□□□ -1.5
SCN2BO60939 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.68□□□□□ -1.5
SCN2BO60939 RPSAP75-201ENST00000605848 301 ntBASIC5.68□□□□□ -1.5
SCN2BO60939 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.68□□□□□ -1.5
SCN2BO60939 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.68□□□□□ -1.5
SCN2BO60939 SNX18P12-201ENST00000624821 759 ntBASIC5.68□□□□□ -1.5
SCN2BO60939 AL357562.1-201ENST00000624911 609 ntBASIC5.68□□□□□ -1.5
SCN2BO60939 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.68□□□□□ -1.5
SCN2BO60939 THAP12P9-201ENST00000503971 2360 ntBASIC5.68□□□□□ -1.5
SCN2BO60939 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SCN2BO60939 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCN2BO60939 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SCN2BO60939 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SCN2BO60939 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCN2BO60939 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
SCN2BO60939 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SCN2BO60939 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.68□□□□□ -1.5
SCN2BO60939 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCN2BO60939 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SCN2BO60939 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCN2BO60939 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.67□□□□□ -1.5
SCN2BO60939 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.67□□□□□ -1.5
SCN2BO60939 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SCN2BO60939 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCN2BO60939 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SCN2BO60939 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.67□□□□□ -1.5
SCN2BO60939 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
SCN2BO60939 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
SCN2BO60939 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCN2BO60939 AL359955.1-201ENST00000455242 3275 ntBASIC5.67□□□□□ -1.5
SCN2BO60939 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCN2BO60939 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
SCN2BO60939 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.67□□□□□ -1.5
SCN2BO60939 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
SCN2BO60939 SNORA21-201ENST00000362423 132 ntBASIC5.67□□□□□ -1.5
SCN2BO60939 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCN2BO60939 MIR191-201ENST00000384873 92 ntBASIC5.67□□□□□ -1.5
SCN2BO60939 PSMA6P1-201ENST00000400275 741 ntBASIC5.67□□□□□ -1.5
SCN2BO60939 RN7SKP38-201ENST00000410782 309 ntBASIC5.67□□□□□ -1.5
SCN2BO60939 RN7SKP144-201ENST00000411108 279 ntBASIC5.67□□□□□ -1.5
SCN2BO60939 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.67□□□□□ -1.5
SCN2BO60939 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.67□□□□□ -1.5
SCN2BO60939 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SCN2BO60939 VN1R20P-201ENST00000425215 966 ntBASIC5.67□□□□□ -1.5
SCN2BO60939 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
SCN2BO60939 REG1CP-206ENST00000447469 496 ntBASIC5.67□□□□□ -1.5
SCN2BO60939 H3F3AP5-201ENST00000475267 429 ntBASIC5.67□□□□□ -1.5
SCN2BO60939 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SCN2BO60939 NACAP5-201ENST00000509863 636 ntBASIC5.67□□□□□ -1.5
SCN2BO60939 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.67□□□□□ -1.5
SCN2BO60939 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.67□□□□□ -1.5
SCN2BO60939 RN7SKP288-201ENST00000516227 268 ntBASIC5.67□□□□□ -1.5
SCN2BO60939 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.67□□□□□ -1.5
SCN2BO60939 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.67□□□□□ -1.5
SCN2BO60939 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.67□□□□□ -1.5
SCN2BO60939 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.67□□□□□ -1.5
SCN2BO60939 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.67□□□□□ -1.5
SCN2BO60939 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.67□□□□□ -1.5
SCN2BO60939 MIR5010-201ENST00000582846 120 ntBASIC5.67□□□□□ -1.5
SCN2BO60939 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.67□□□□□ -1.5
SCN2BO60939 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.67□□□□□ -1.5
SCN2BO60939 AP001357.1-201ENST00000586304 1053 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms