Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
LMX1BO60663 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.45□□□□□ -1.54
LMX1BO60663 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LMX1BO60663 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LMX1BO60663 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
LMX1BO60663 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.45□□□□□ -1.54
LMX1BO60663 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LMX1BO60663 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
LMX1BO60663 SNORD16-201ENST00000362803 99 ntBASIC5.45□□□□□ -1.54
LMX1BO60663 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
LMX1BO60663 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.45□□□□□ -1.54
LMX1BO60663 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.45□□□□□ -1.54
LMX1BO60663 SNORA81-201ENST00000408493 178 ntBASIC5.45□□□□□ -1.54
LMX1BO60663 SNORA77.2-201ENST00000408571 112 ntBASIC5.45□□□□□ -1.54
LMX1BO60663 RNU2-72P-201ENST00000411175 163 ntBASIC5.45□□□□□ -1.54
LMX1BO60663 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.45□□□□□ -1.54
LMX1BO60663 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.45□□□□□ -1.54
LMX1BO60663 AC106901.1-201ENST00000425086 698 ntBASIC5.45□□□□□ -1.54
LMX1BO60663 AC092865.3-201ENST00000425390 1026 ntBASIC5.45□□□□□ -1.54
LMX1BO60663 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC5.45□□□□□ -1.54
LMX1BO60663 AL390879.2-203ENST00000426943 1121 ntBASIC5.45□□□□□ -1.54
LMX1BO60663 BX119904.3-201ENST00000428194 957 ntBASIC5.45□□□□□ -1.54
LMX1BO60663 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.45□□□□□ -1.54
LMX1BO60663 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.45□□□□□ -1.54
LMX1BO60663 OR13K1P-201ENST00000444577 975 ntBASIC5.45□□□□□ -1.54
LMX1BO60663 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC5.45□□□□□ -1.54
LMX1BO60663 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
LMX1BO60663 AC115223.1-201ENST00000466377 870 ntBASIC5.45□□□□□ -1.54
LMX1BO60663 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LMX1BO60663 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.45□□□□□ -1.54
LMX1BO60663 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.45□□□□□ -1.54
LMX1BO60663 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.45□□□□□ -1.54
LMX1BO60663 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LMX1BO60663 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.45□□□□□ -1.54
LMX1BO60663 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LMX1BO60663 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.45□□□□□ -1.54
LMX1BO60663 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
LMX1BO60663 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.45□□□□□ -1.54
LMX1BO60663 AC026898.1-201ENST00000586404 571 ntBASIC5.45□□□□□ -1.54
LMX1BO60663 AC124916.2-201ENST00000604416 224 ntBASIC5.45□□□□□ -1.54
LMX1BO60663 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.45□□□□□ -1.54
LMX1BO60663 AC006924.1-201ENST00000610750 559 ntBASIC5.45□□□□□ -1.54
LMX1BO60663 MIR6811-201ENST00000620409 58 ntBASIC5.45□□□□□ -1.54
LMX1BO60663 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
LMX1BO60663 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.45□□□□□ -1.54
LMX1BO60663 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LMX1BO60663 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
LMX1BO60663 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.45□□□□□ -1.54
LMX1BO60663 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LMX1BO60663 AC233968.1-201ENST00000611212 1300 ntBASIC5.45□□□□□ -1.54
LMX1BO60663 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LMX1BO60663 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
LMX1BO60663 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
LMX1BO60663 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.44□□□□□ -1.54
LMX1BO60663 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.44□□□□□ -1.54
LMX1BO60663 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
LMX1BO60663 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LMX1BO60663 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.44□□□□□ -1.54
LMX1BO60663 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.44□□□□□ -1.54
LMX1BO60663 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LMX1BO60663 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
LMX1BO60663 RN7SKP78-201ENST00000364711 318 ntBASIC5.44□□□□□ -1.54
LMX1BO60663 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
LMX1BO60663 AC003045.1-201ENST00000398779 713 ntBASIC5.44□□□□□ -1.54
LMX1BO60663 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.44□□□□□ -1.54
LMX1BO60663 DHFRP5-201ENST00000406944 564 ntBASIC5.44□□□□□ -1.54
LMX1BO60663 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.44□□□□□ -1.54
LMX1BO60663 HMGA1P8-201ENST00000414130 321 ntBASIC5.44□□□□□ -1.54
LMX1BO60663 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
LMX1BO60663 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.44□□□□□ -1.54
LMX1BO60663 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.44□□□□□ -1.54
LMX1BO60663 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC5.44□□□□□ -1.54
LMX1BO60663 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.44□□□□□ -1.54
LMX1BO60663 AC079922.1-201ENST00000443291 359 ntBASIC5.44□□□□□ -1.54
LMX1BO60663 CYCSP53-201ENST00000455540 265 ntBASIC5.44□□□□□ -1.54
LMX1BO60663 AC112187.1-201ENST00000455837 479 ntBASIC5.44□□□□□ -1.54
LMX1BO60663 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.44□□□□□ -1.54
LMX1BO60663 AC009963.3-201ENST00000458090 486 ntBASIC5.44□□□□□ -1.54
LMX1BO60663 AC018635.1-201ENST00000468292 1030 ntBASIC5.44□□□□□ -1.54
LMX1BO60663 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.44□□□□□ -1.54
LMX1BO60663 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.44□□□□□ -1.54
LMX1BO60663 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.44□□□□□ -1.54
LMX1BO60663 AC011411.1-201ENST00000509592 876 ntBASIC5.44□□□□□ -1.54
LMX1BO60663 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.44□□□□□ -1.54
LMX1BO60663 RNA5SP400-201ENST00000517155 111 ntBASIC5.44□□□□□ -1.54
LMX1BO60663 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.44□□□□□ -1.54
LMX1BO60663 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.44□□□□□ -1.54
LMX1BO60663 AC110056.1-201ENST00000525759 911 ntBASIC5.44□□□□□ -1.54
LMX1BO60663 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LMX1BO60663 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
LMX1BO60663 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.44□□□□□ -1.54
LMX1BO60663 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.44□□□□□ -1.54
LMX1BO60663 AC005632.2-201ENST00000564271 828 ntBASIC5.44□□□□□ -1.54
LMX1BO60663 AC090651.1-201ENST00000567865 634 ntBASIC5.44□□□□□ -1.54
LMX1BO60663 AC004232.2-201ENST00000574245 821 ntBASIC5.44□□□□□ -1.54
LMX1BO60663 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.44□□□□□ -1.54
LMX1BO60663 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
LMX1BO60663 AC005332.4-201ENST00000592752 579 ntBASIC5.44□□□□□ -1.54
LMX1BO60663 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.44□□□□□ -1.54
LMX1BO60663 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms