Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ZIC3O60481 IFIT1P1-201ENST00000400497 1449 ntBASIC5.59□□□□□ -1.51
ZIC3O60481 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ZIC3O60481 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.59□□□□□ -1.51
ZIC3O60481 HDAC1P2-201ENST00000453661 1398 ntBASIC5.59□□□□□ -1.51
ZIC3O60481 AC119674.1-213ENST00000641177 1386 ntBASIC5.59□□□□□ -1.51
ZIC3O60481 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC5.59□□□□□ -1.51
ZIC3O60481 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ZIC3O60481 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.59□□□□□ -1.51
ZIC3O60481 AC096921.2-201ENST00000561507 1916 ntBASIC5.59□□□□□ -1.51
ZIC3O60481 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
ZIC3O60481 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
ZIC3O60481 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.59□□□□□ -1.51
ZIC3O60481 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.59□□□□□ -1.51
ZIC3O60481 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.59□□□□□ -1.51
ZIC3O60481 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ZIC3O60481 HSFY1P1-201ENST00000423928 1178 ntBASIC5.59□□□□□ -1.51
ZIC3O60481 AC130360.1-201ENST00000425489 1117 ntBASIC5.59□□□□□ -1.51
ZIC3O60481 MTND4LP14-201ENST00000429447 288 ntBASIC5.59□□□□□ -1.51
ZIC3O60481 AC023141.3-201ENST00000436698 278 ntBASIC5.59□□□□□ -1.51
ZIC3O60481 OR3D1P-201ENST00000438288 955 ntBASIC5.59□□□□□ -1.51
ZIC3O60481 AC097463.1-201ENST00000447288 481 ntBASIC5.59□□□□□ -1.51
ZIC3O60481 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.59□□□□□ -1.51
ZIC3O60481 AC073594.1-201ENST00000462065 364 ntBASIC5.59□□□□□ -1.51
ZIC3O60481 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.59□□□□□ -1.51
ZIC3O60481 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC5.59□□□□□ -1.51
ZIC3O60481 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.59□□□□□ -1.51
ZIC3O60481 AC025768.1-201ENST00000510057 267 ntBASIC5.59□□□□□ -1.51
ZIC3O60481 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.59□□□□□ -1.51
ZIC3O60481 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.59□□□□□ -1.51
ZIC3O60481 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.59□□□□□ -1.51
ZIC3O60481 RNA5SP400-201ENST00000517155 111 ntBASIC5.59□□□□□ -1.51
ZIC3O60481 NPM1P52-201ENST00000518264 846 ntBASIC5.59□□□□□ -1.51
ZIC3O60481 IGKV3D-25-201ENST00000519599 235 ntBASIC5.59□□□□□ -1.51
ZIC3O60481 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ZIC3O60481 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.59□□□□□ -1.51
ZIC3O60481 AC130365.2-201ENST00000525882 1201 ntBASIC5.59□□□□□ -1.51
ZIC3O60481 AC005000.1-201ENST00000536192 288 ntBASIC5.59□□□□□ -1.51
ZIC3O60481 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.59□□□□□ -1.51
ZIC3O60481 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.59□□□□□ -1.51
ZIC3O60481 AC092332.1-201ENST00000563684 829 ntBASIC5.59□□□□□ -1.51
ZIC3O60481 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.59□□□□□ -1.51
ZIC3O60481 AC002310.3-201ENST00000569728 723 ntBASIC5.59□□□□□ -1.51
ZIC3O60481 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ZIC3O60481 MIR4301-201ENST00000577203 66 ntBASIC5.59□□□□□ -1.51
ZIC3O60481 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
ZIC3O60481 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ZIC3O60481 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.59□□□□□ -1.51
ZIC3O60481 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.59□□□□□ -1.51
ZIC3O60481 AL499605.1-201ENST00000604628 403 ntBASIC5.59□□□□□ -1.51
ZIC3O60481 AC008555.7-201ENST00000605008 583 ntBASIC5.59□□□□□ -1.51
ZIC3O60481 AL683813.2-201ENST00000605245 502 ntBASIC5.59□□□□□ -1.51
ZIC3O60481 AL021368.3-201ENST00000607119 578 ntBASIC5.59□□□□□ -1.51
ZIC3O60481 AP001437.1-201ENST00000608783 456 ntBASIC5.59□□□□□ -1.51
ZIC3O60481 AC092681.3-201ENST00000609463 678 ntBASIC5.59□□□□□ -1.51
ZIC3O60481 RFPL4AP6-201ENST00000616792 846 ntBASIC5.59□□□□□ -1.51
ZIC3O60481 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.59□□□□□ -1.51
ZIC3O60481 AC009135.2-201ENST00000624136 1768 ntBASIC5.59□□□□□ -1.51
ZIC3O60481 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
ZIC3O60481 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
ZIC3O60481 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
ZIC3O60481 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.52
ZIC3O60481 AC022325.1-201ENST00000502748 2199 ntBASIC5.59□□□□□ -1.52
ZIC3O60481 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.59□□□□□ -1.52
ZIC3O60481 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
ZIC3O60481 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
ZIC3O60481 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
ZIC3O60481 AOX3P-204ENST00000491025 2107 ntBASIC5.59□□□□□ -1.52
ZIC3O60481 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.59□□□□□ -1.52
ZIC3O60481 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
ZIC3O60481 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
ZIC3O60481 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ZIC3O60481 AC083899.2-201ENST00000423285 1376 ntBASIC5.58□□□□□ -1.52
ZIC3O60481 AL354854.1-201ENST00000455940 1363 ntBASIC5.58□□□□□ -1.52
ZIC3O60481 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC5.58□□□□□ -1.52
ZIC3O60481 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ZIC3O60481 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ZIC3O60481 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
ZIC3O60481 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ZIC3O60481 DPY19L1P1-201ENST00000417811 2594 ntBASIC5.58□□□□□ -1.52
ZIC3O60481 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
ZIC3O60481 SNORD8-201ENST00000363915 110 ntBASIC5.58□□□□□ -1.52
ZIC3O60481 SNORA51.9-201ENST00000384295 124 ntBASIC5.58□□□□□ -1.52
ZIC3O60481 RNA5SP115-201ENST00000411160 107 ntBASIC5.58□□□□□ -1.52
ZIC3O60481 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.58□□□□□ -1.52
ZIC3O60481 HSFY7P-201ENST00000432672 318 ntBASIC5.58□□□□□ -1.52
ZIC3O60481 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.58□□□□□ -1.52
ZIC3O60481 HSFY8P-201ENST00000437934 318 ntBASIC5.58□□□□□ -1.52
ZIC3O60481 AL353662.1-201ENST00000439099 327 ntBASIC5.58□□□□□ -1.52
ZIC3O60481 AMYP1-201ENST00000440059 1023 ntBASIC5.58□□□□□ -1.52
ZIC3O60481 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.58□□□□□ -1.52
ZIC3O60481 VN1R48P-201ENST00000448149 1036 ntBASIC5.58□□□□□ -1.52
ZIC3O60481 AC002553.3-201ENST00000453002 341 ntBASIC5.58□□□□□ -1.52
ZIC3O60481 HSFY5P-201ENST00000453726 309 ntBASIC5.58□□□□□ -1.52
ZIC3O60481 AC103563.5-201ENST00000455643 364 ntBASIC5.58□□□□□ -1.52
ZIC3O60481 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.58□□□□□ -1.52
ZIC3O60481 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.58□□□□□ -1.52
ZIC3O60481 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.58□□□□□ -1.52
ZIC3O60481 NPM1P28-201ENST00000492269 840 ntBASIC5.58□□□□□ -1.52
ZIC3O60481 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms