Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
LINC01558Q9Y6Z2 EEF1A1P21-201ENST00000512363 1344 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 IKZF3-206ENST00000351680 1413 ntTSL 5 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AC012020.1-201ENST00000624541 1728 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AL133243.3-201ENST00000617415 3004 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 PLRG1-201ENST00000302078 1673 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AC074198.1-201ENST00000506546 1397 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 OR1J4-201ENST00000340750 942 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AC019077.1-201ENST00000356499 397 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 Metazoa_SRP.2-201ENST00000359385 269 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 RN7SKP104-201ENST00000362605 328 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 TCTE3-201ENST00000366774 769 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 RGS10-203ENST00000392865 852 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AC113608.1-201ENST00000398740 305 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AL590617.1-201ENST00000405630 748 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AL512430.2-201ENST00000406786 339 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 RPL21P108-201ENST00000413857 481 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 LINC01392-201ENST00000419883 565 ntTSL 5 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 ZEB2-AS1-201ENST00000421083 453 ntTSL 2 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 EIF4EP1-201ENST00000422311 642 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 RIMKLBP2-201ENST00000424737 654 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AC016734.1-201ENST00000436998 654 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AC069285.2-201ENST00000440210 275 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 SFTPA3P-201ENST00000446429 367 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AL596266.1-201ENST00000448132 400 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AC092421.1-201ENST00000448148 418 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AL450023.2-201ENST00000453276 545 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 CEACAM22P-203ENST00000455455 545 ntTSL 4 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AC092042.1-201ENST00000457115 509 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 CCDC75P1-201ENST00000469247 791 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 CREM-226ENST00000469949 721 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AC091982.1-202ENST00000473923 343 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 CBX1P5-201ENST00000475330 559 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 LINC02148-201ENST00000503877 1223 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 TRMT112P1-201ENST00000505515 351 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 IMPA1P1-201ENST00000510718 842 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 VWA8P1-201ENST00000510889 176 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 ELL2P2-201ENST00000515135 694 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 MIR2277-201ENST00000515916 93 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AC023194.3-201ENST00000522679 277 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 MTND6P20-201ENST00000522986 418 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 ETFRF1-209ENST00000556885 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AC092119.1-201ENST00000562640 934 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AC132938.1-201ENST00000566971 360 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 RN7SL408P-201ENST00000577207 296 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 RNU4ATAC-201ENST00000580972 127 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 MIR2467-201ENST00000584559 81 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AC011472.3-201ENST00000586051 906 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AC114488.2-208ENST00000591592 578 ntTSL 5 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AL158835.1-202ENST00000607914 365 ntTSL 5 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AL365181.4-201ENST00000609800 547 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 RN7SL261P-201ENST00000613441 282 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AC239600.2-201ENST00000619615 1165 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AC016542.3-201ENST00000623520 619 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AC027176.3-201ENST00000624460 586 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 AL356121.2-201ENST00000624715 780 ntBASIC2.93□□□□□ -1.94
LINC01558Q9Y6Z2 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms