Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42BPBQ9Y5S2 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42BPBQ9Y5S2 Y_RNA.625-201ENST00000411256 107 ntBASIC8.73□□□□□ -1.01
CDC42BPBQ9Y5S2 RPS27P18-201ENST00000431701 247 ntBASIC8.73□□□□□ -1.01
CDC42BPBQ9Y5S2 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC8.73□□□□□ -1.01
CDC42BPBQ9Y5S2 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC8.73□□□□□ -1.01
CDC42BPBQ9Y5S2 NDUFB5P1-201ENST00000508134 564 ntBASIC8.73□□□□□ -1.01
CDC42BPBQ9Y5S2 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC8.73□□□□□ -1.01
CDC42BPBQ9Y5S2 AC004825.1-201ENST00000555068 586 ntBASIC8.73□□□□□ -1.01
CDC42BPBQ9Y5S2 AC106730.2-201ENST00000566641 540 ntBASIC8.73□□□□□ -1.01
CDC42BPBQ9Y5S2 AC020765.1-201ENST00000604296 328 ntBASIC8.73□□□□□ -1.01
CDC42BPBQ9Y5S2 AC008115.3-201ENST00000614874 549 ntBASIC8.73□□□□□ -1.01
CDC42BPBQ9Y5S2 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC8.73□□□□□ -1.01
CDC42BPBQ9Y5S2 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
CDC42BPBQ9Y5S2 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42BPBQ9Y5S2 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC8.73□□□□□ -1.01
CDC42BPBQ9Y5S2 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42BPBQ9Y5S2 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42BPBQ9Y5S2 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC8.73□□□□□ -1.01
CDC42BPBQ9Y5S2 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
CDC42BPBQ9Y5S2 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC8.73□□□□□ -1.01
CDC42BPBQ9Y5S2 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC8.73□□□□□ -1.01
CDC42BPBQ9Y5S2 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC8.72□□□□□ -1.01
CDC42BPBQ9Y5S2 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42BPBQ9Y5S2 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42BPBQ9Y5S2 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42BPBQ9Y5S2 PSMD10P3-201ENST00000437000 448 ntBASIC8.72□□□□□ -1.01
CDC42BPBQ9Y5S2 RPL12P3-201ENST00000440080 396 ntBASIC8.72□□□□□ -1.01
CDC42BPBQ9Y5S2 AC092106.1-201ENST00000444291 373 ntBASIC8.72□□□□□ -1.01
CDC42BPBQ9Y5S2 H2AFZP6-201ENST00000444403 394 ntBASIC8.72□□□□□ -1.01
CDC42BPBQ9Y5S2 AC091685.2-201ENST00000454924 864 ntBASIC8.72□□□□□ -1.01
CDC42BPBQ9Y5S2 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC8.72□□□□□ -1.01
CDC42BPBQ9Y5S2 LDHBP2-201ENST00000456969 1005 ntBASIC8.72□□□□□ -1.01
CDC42BPBQ9Y5S2 RPL35AP28-201ENST00000459730 331 ntBASIC8.72□□□□□ -1.01
CDC42BPBQ9Y5S2 AC026254.2-201ENST00000475295 371 ntBASIC8.72□□□□□ -1.01
CDC42BPBQ9Y5S2 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC8.72□□□□□ -1.01
CDC42BPBQ9Y5S2 AC126615.2-201ENST00000553003 515 ntBASIC8.72□□□□□ -1.01
CDC42BPBQ9Y5S2 OR11J2P-201ENST00000555298 907 ntBASIC8.72□□□□□ -1.01
CDC42BPBQ9Y5S2 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC8.72□□□□□ -1.01
CDC42BPBQ9Y5S2 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC8.72□□□□□ -1.01
CDC42BPBQ9Y5S2 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC8.72□□□□□ -1.01
CDC42BPBQ9Y5S2 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
CDC42BPBQ9Y5S2 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42BPBQ9Y5S2 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42BPBQ9Y5S2 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC8.72□□□□□ -1.01
CDC42BPBQ9Y5S2 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC8.72□□□□□ -1.01
CDC42BPBQ9Y5S2 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
CDC42BPBQ9Y5S2 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42BPBQ9Y5S2 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC8.72□□□□□ -1.01
CDC42BPBQ9Y5S2 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
CDC42BPBQ9Y5S2 MITF-203ENST00000328528 4680 ntTSL 5 BASIC8.72□□□□□ -1.01
CDC42BPBQ9Y5S2 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
CDC42BPBQ9Y5S2 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
CDC42BPBQ9Y5S2 AL121768.1-201ENST00000613917 2544 ntBASIC8.71□□□□□ -1.01
CDC42BPBQ9Y5S2 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC8.71□□□□□ -1.01
CDC42BPBQ9Y5S2 AC011742.2-201ENST00000443818 352 ntBASIC8.71□□□□□ -1.01
CDC42BPBQ9Y5S2 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC8.71□□□□□ -1.01
CDC42BPBQ9Y5S2 AC105420.1-201ENST00000504389 582 ntBASIC8.71□□□□□ -1.01
CDC42BPBQ9Y5S2 AC105384.2-201ENST00000508433 640 ntBASIC8.71□□□□□ -1.01
CDC42BPBQ9Y5S2 AC015720.2-201ENST00000567709 334 ntBASIC8.71□□□□□ -1.01
CDC42BPBQ9Y5S2 MIR6748-201ENST00000610433 71 ntBASIC8.71□□□□□ -1.01
CDC42BPBQ9Y5S2 MIR6837-201ENST00000620884 64 ntBASIC8.71□□□□□ -1.01
CDC42BPBQ9Y5S2 AP002505.2-201ENST00000623585 696 ntBASIC8.71□□□□□ -1.01
CDC42BPBQ9Y5S2 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC8.71□□□□□ -1.01
CDC42BPBQ9Y5S2 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC8.71□□□□□ -1.01
CDC42BPBQ9Y5S2 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
CDC42BPBQ9Y5S2 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
CDC42BPBQ9Y5S2 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
CDC42BPBQ9Y5S2 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC8.71□□□□□ -1.01
CDC42BPBQ9Y5S2 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
CDC42BPBQ9Y5S2 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
CDC42BPBQ9Y5S2 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
CDC42BPBQ9Y5S2 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC8.71□□□□□ -1.01
CDC42BPBQ9Y5S2 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
CDC42BPBQ9Y5S2 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
CDC42BPBQ9Y5S2 EEF1A1P14-201ENST00000421195 1376 ntBASIC8.71□□□□□ -1.01
CDC42BPBQ9Y5S2 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
CDC42BPBQ9Y5S2 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
CDC42BPBQ9Y5S2 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
CDC42BPBQ9Y5S2 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC8.71□□□□□ -1.02
CDC42BPBQ9Y5S2 AC006213.6-201ENST00000623722 4179 ntBASIC8.71□□□□□ -1.02
CDC42BPBQ9Y5S2 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
CDC42BPBQ9Y5S2 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
CDC42BPBQ9Y5S2 NIFKP3-201ENST00000417799 865 ntBASIC8.71□□□□□ -1.02
CDC42BPBQ9Y5S2 RPS23P1-201ENST00000491662 432 ntBASIC8.71□□□□□ -1.02
CDC42BPBQ9Y5S2 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC8.71□□□□□ -1.02
CDC42BPBQ9Y5S2 AL390726.5-202ENST00000564800 256 ntBASIC8.71□□□□□ -1.02
CDC42BPBQ9Y5S2 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC8.71□□□□□ -1.02
CDC42BPBQ9Y5S2 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC8.71□□□□□ -1.02
CDC42BPBQ9Y5S2 AL137246.2-201ENST00000613439 662 ntBASIC8.71□□□□□ -1.02
CDC42BPBQ9Y5S2 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC8.71□□□□□ -1.02
CDC42BPBQ9Y5S2 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42BPBQ9Y5S2 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
CDC42BPBQ9Y5S2 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42BPBQ9Y5S2 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC8.7□□□□□ -1.02
CDC42BPBQ9Y5S2 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42BPBQ9Y5S2 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42BPBQ9Y5S2 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42BPBQ9Y5S2 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42BPBQ9Y5S2 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms