Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC8.78□□□□□ -1
SHANK2Q9UPX8 CCDC11P1-201ENST00000503137 1162 ntBASIC8.78□□□□□ -1
SHANK2Q9UPX8 RN7SKP98-201ENST00000517070 156 ntBASIC8.78□□□□□ -1
SHANK2Q9UPX8 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC8.78□□□□□ -1
SHANK2Q9UPX8 LDHC-203ENST00000535809 757 ntTSL 5 BASIC8.78□□□□□ -1
SHANK2Q9UPX8 LDHC-205ENST00000537486 583 ntTSL 5 BASIC8.78□□□□□ -1
SHANK2Q9UPX8 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC8.78□□□□□ -1
SHANK2Q9UPX8 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC8.78□□□□□ -1
SHANK2Q9UPX8 HOTTIP_3.1-201ENST00000619957 337 ntBASIC8.78□□□□□ -1
SHANK2Q9UPX8 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC8.78□□□□□ -1
SHANK2Q9UPX8 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
SHANK2Q9UPX8 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
SHANK2Q9UPX8 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SHANK2Q9UPX8 USP9YP3-201ENST00000434481 1766 ntBASIC8.78□□□□□ -1
SHANK2Q9UPX8 CAST-222ENST00000508579 1758 ntTSL 2 BASIC8.78□□□□□ -1
SHANK2Q9UPX8 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SHANK2Q9UPX8 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SHANK2Q9UPX8 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC8.78□□□□□ -1
SHANK2Q9UPX8 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
SHANK2Q9UPX8 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
SHANK2Q9UPX8 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SHANK2Q9UPX8 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC8.78□□□□□ -1
SHANK2Q9UPX8 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1
SHANK2Q9UPX8 AC092111.1-201ENST00000618256 3358 ntBASIC8.77□□□□□ -1
SHANK2Q9UPX8 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1
SHANK2Q9UPX8 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC8.77□□□□□ -1
SHANK2Q9UPX8 RNA5SP183-201ENST00000362452 119 ntBASIC8.77□□□□□ -1
SHANK2Q9UPX8 AL645937.3-201ENST00000453647 936 ntBASIC8.77□□□□□ -1
SHANK2Q9UPX8 OARD1-211ENST00000480585 829 ntTSL 3 BASIC8.77□□□□□ -1
SHANK2Q9UPX8 RNA5SP228-201ENST00000516232 133 ntBASIC8.77□□□□□ -1
SHANK2Q9UPX8 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC8.77□□□□□ -1
SHANK2Q9UPX8 PPATP2-201ENST00000605635 508 ntBASIC8.77□□□□□ -1
SHANK2Q9UPX8 AC007204.2-201ENST00000615022 616 ntBASIC8.77□□□□□ -1
SHANK2Q9UPX8 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC8.77□□□□□ -1
SHANK2Q9UPX8 AC130304.1-201ENST00000622942 2385 ntBASIC8.77□□□□□ -1.01
SHANK2Q9UPX8 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
SHANK2Q9UPX8 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SHANK2Q9UPX8 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC8.77□□□□□ -1.01
SHANK2Q9UPX8 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
SHANK2Q9UPX8 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
SHANK2Q9UPX8 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
SHANK2Q9UPX8 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC8.77□□□□□ -1.01
SHANK2Q9UPX8 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
SHANK2Q9UPX8 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SHANK2Q9UPX8 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SHANK2Q9UPX8 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
SHANK2Q9UPX8 RBMY2KP-201ENST00000418221 992 ntBASIC8.77□□□□□ -1.01
SHANK2Q9UPX8 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC8.77□□□□□ -1.01
SHANK2Q9UPX8 AC016027.5-201ENST00000427227 210 ntBASIC8.77□□□□□ -1.01
SHANK2Q9UPX8 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC8.77□□□□□ -1.01
SHANK2Q9UPX8 ASB8-215ENST00000540782 659 ntTSL 3 BASIC8.77□□□□□ -1.01
SHANK2Q9UPX8 DCN-210ENST00000547568 823 ntTSL 3 BASIC8.77□□□□□ -1.01
SHANK2Q9UPX8 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC8.77□□□□□ -1.01
SHANK2Q9UPX8 HSPE1P2-201ENST00000554777 306 ntBASIC8.77□□□□□ -1.01
SHANK2Q9UPX8 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SHANK2Q9UPX8 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC8.77□□□□□ -1.01
SHANK2Q9UPX8 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
SHANK2Q9UPX8 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
SHANK2Q9UPX8 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SHANK2Q9UPX8 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC8.76□□□□□ -1.01
SHANK2Q9UPX8 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SHANK2Q9UPX8 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC8.76□□□□□ -1.01
SHANK2Q9UPX8 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SHANK2Q9UPX8 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
SHANK2Q9UPX8 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC8.76□□□□□ -1.01
SHANK2Q9UPX8 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
SHANK2Q9UPX8 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
SHANK2Q9UPX8 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SHANK2Q9UPX8 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC8.76□□□□□ -1.01
SHANK2Q9UPX8 SNORD8-201ENST00000363915 110 ntBASIC8.76□□□□□ -1.01
SHANK2Q9UPX8 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC8.76□□□□□ -1.01
SHANK2Q9UPX8 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC8.76□□□□□ -1.01
SHANK2Q9UPX8 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC8.76□□□□□ -1.01
SHANK2Q9UPX8 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC8.76□□□□□ -1.01
SHANK2Q9UPX8 RPL35AP28-201ENST00000459730 331 ntBASIC8.76□□□□□ -1.01
SHANK2Q9UPX8 CBX1P5-201ENST00000475330 559 ntBASIC8.76□□□□□ -1.01
SHANK2Q9UPX8 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC8.76□□□□□ -1.01
SHANK2Q9UPX8 TPM3P3-201ENST00000521343 354 ntBASIC8.76□□□□□ -1.01
SHANK2Q9UPX8 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC8.76□□□□□ -1.01
SHANK2Q9UPX8 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC8.76□□□□□ -1.01
SHANK2Q9UPX8 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC8.76□□□□□ -1.01
SHANK2Q9UPX8 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC8.76□□□□□ -1.01
SHANK2Q9UPX8 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC8.76□□□□□ -1.01
SHANK2Q9UPX8 AL445222.1-201ENST00000607259 628 ntBASIC8.76□□□□□ -1.01
SHANK2Q9UPX8 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
SHANK2Q9UPX8 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC8.76□□□□□ -1.01
SHANK2Q9UPX8 MAPK10-338ENST00000641647 3362 ntBASIC8.75□□□□□ -1.01
SHANK2Q9UPX8 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC8.75□□□□□ -1.01
SHANK2Q9UPX8 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC8.75□□□□□ -1.01
SHANK2Q9UPX8 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC8.75□□□□□ -1.01
SHANK2Q9UPX8 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SHANK2Q9UPX8 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SHANK2Q9UPX8 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC8.75□□□□□ -1.01
SHANK2Q9UPX8 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
SHANK2Q9UPX8 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
SHANK2Q9UPX8 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
SHANK2Q9UPX8 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SHANK2Q9UPX8 AL159987.1-201ENST00000347911 293 ntBASIC8.75□□□□□ -1.01
SHANK2Q9UPX8 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC8.75□□□□□ -1.01
SHANK2Q9UPX8 HMGB3P24-201ENST00000433260 622 ntBASIC8.75□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms