Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 WBP1LP3-201ENST00000523033 208 ntBASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 GARSP1-201ENST00000570895 719 ntBASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 AC011445.2-201ENST00000599274 173 ntBASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 AP003789.1-201ENST00000617737 605 ntBASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 OR11H2-202ENST00000641517 1085 ntBASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 AC084782.1-201ENST00000564401 2465 ntBASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 AC010329.1-201ENST00000593903 8328 ntBASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 LINC01963-201ENST00000562038 3148 ntBASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 SNX18P3-202ENST00000565670 1750 ntBASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
NPC1L1Q9UHC9 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
NPC1L1Q9UHC9 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
NPC1L1Q9UHC9 SLC20A1P1-201ENST00000413906 956 ntBASIC7.98□□□□□ -1.13
NPC1L1Q9UHC9 CHEK2P5-201ENST00000423877 246 ntBASIC7.98□□□□□ -1.13
NPC1L1Q9UHC9 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
NPC1L1Q9UHC9 AC073109.1-201ENST00000445066 978 ntBASIC7.98□□□□□ -1.13
NPC1L1Q9UHC9 GAPDHP71-201ENST00000511530 1003 ntBASIC7.98□□□□□ -1.13
NPC1L1Q9UHC9 RNA5SP116-201ENST00000516132 98 ntBASIC7.98□□□□□ -1.13
NPC1L1Q9UHC9 SCARNA9-201ENST00000530422 353 ntBASIC7.98□□□□□ -1.13
NPC1L1Q9UHC9 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC7.98□□□□□ -1.13
NPC1L1Q9UHC9 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC7.98□□□□□ -1.13
NPC1L1Q9UHC9 AC126615.2-201ENST00000553003 515 ntBASIC7.98□□□□□ -1.13
NPC1L1Q9UHC9 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.98□□□□□ -1.13
NPC1L1Q9UHC9 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.98□□□□□ -1.13
NPC1L1Q9UHC9 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.98□□□□□ -1.13
NPC1L1Q9UHC9 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC7.98□□□□□ -1.13
NPC1L1Q9UHC9 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.98□□□□□ -1.13
NPC1L1Q9UHC9 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.98□□□□□ -1.13
NPC1L1Q9UHC9 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
NPC1L1Q9UHC9 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
NPC1L1Q9UHC9 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
NPC1L1Q9UHC9 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC7.98□□□□□ -1.13
NPC1L1Q9UHC9 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
NPC1L1Q9UHC9 NBPF8-201ENST00000583271 5330 ntBASIC7.98□□□□□ -1.13
NPC1L1Q9UHC9 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
NPC1L1Q9UHC9 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.98□□□□□ -1.13
NPC1L1Q9UHC9 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC7.98□□□□□ -1.13
NPC1L1Q9UHC9 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
NPC1L1Q9UHC9 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
NPC1L1Q9UHC9 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 LSM5-203ENST00000409782 649 ntTSL 5 BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 RN7SKP29-201ENST00000410957 272 ntBASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 BX323845.3-201ENST00000428215 527 ntBASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 RPL12P16-201ENST00000431098 498 ntBASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 AK3P5-201ENST00000432033 519 ntBASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 AC007346.2-201ENST00000564816 892 ntBASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 AC009962.1-201ENST00000567327 3813 ntBASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 AL161756.3-201ENST00000641216 2071 ntBASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 AC005725.1-201ENST00000577346 2607 ntBASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 RN7SKP292-201ENST00000365522 317 ntBASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 PPCS-201ENST00000372556 984 ntTSL 2 BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 AL031985.1-201ENST00000392713 418 ntBASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 Z68694.1-201ENST00000413929 841 ntBASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 NENFP3-201ENST00000503735 313 ntBASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 AC114781.3-201ENST00000512083 142 ntBASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 DPPA2P4-201ENST00000563717 878 ntBASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms