Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.96□□□□□ -1.3
COL20A1Q9P218 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.96□□□□□ -1.3
COL20A1Q9P218 AC068522.1-201ENST00000482895 345 ntBASIC6.96□□□□□ -1.3
COL20A1Q9P218 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC6.96□□□□□ -1.3
COL20A1Q9P218 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.96□□□□□ -1.3
COL20A1Q9P218 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.96□□□□□ -1.3
COL20A1Q9P218 AL136520.1-202ENST00000555494 763 ntBASIC6.96□□□□□ -1.3
COL20A1Q9P218 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
COL20A1Q9P218 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
COL20A1Q9P218 MIR6862-1-201ENST00000613016 70 ntBASIC6.96□□□□□ -1.3
COL20A1Q9P218 MIR6862-2-201ENST00000614755 70 ntBASIC6.96□□□□□ -1.3
COL20A1Q9P218 AC096861.1-201ENST00000616652 240 ntBASIC6.96□□□□□ -1.3
COL20A1Q9P218 AC245014.3-201ENST00000618589 347 ntBASIC6.96□□□□□ -1.3
COL20A1Q9P218 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COL20A1Q9P218 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.96□□□□□ -1.3
COL20A1Q9P218 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
COL20A1Q9P218 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
COL20A1Q9P218 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
COL20A1Q9P218 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COL20A1Q9P218 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.96□□□□□ -1.3
COL20A1Q9P218 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.95□□□□□ -1.3
COL20A1Q9P218 AC011369.2-201ENST00000624423 1567 ntBASIC6.95□□□□□ -1.3
COL20A1Q9P218 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.95□□□□□ -1.3
COL20A1Q9P218 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL20A1Q9P218 AL031651.1-201ENST00000615357 1438 ntBASIC6.95□□□□□ -1.3
COL20A1Q9P218 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL20A1Q9P218 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.95□□□□□ -1.3
COL20A1Q9P218 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.95□□□□□ -1.3
COL20A1Q9P218 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL20A1Q9P218 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
COL20A1Q9P218 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL20A1Q9P218 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
COL20A1Q9P218 RNU1-150P-201ENST00000362491 162 ntBASIC6.95□□□□□ -1.3
COL20A1Q9P218 RNU6-670P-201ENST00000364312 104 ntBASIC6.95□□□□□ -1.3
COL20A1Q9P218 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.95□□□□□ -1.3
COL20A1Q9P218 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.95□□□□□ -1.3
COL20A1Q9P218 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
COL20A1Q9P218 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.95□□□□□ -1.3
COL20A1Q9P218 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.95□□□□□ -1.3
COL20A1Q9P218 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.95□□□□□ -1.3
COL20A1Q9P218 BX323845.3-201ENST00000428215 527 ntBASIC6.95□□□□□ -1.3
COL20A1Q9P218 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC6.95□□□□□ -1.3
COL20A1Q9P218 FABP5P2-201ENST00000439042 408 ntBASIC6.95□□□□□ -1.3
COL20A1Q9P218 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.95□□□□□ -1.3
COL20A1Q9P218 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.95□□□□□ -1.3
COL20A1Q9P218 MTND2P39-201ENST00000457230 764 ntBASIC6.95□□□□□ -1.3
COL20A1Q9P218 RN7SL221P-201ENST00000466190 281 ntBASIC6.95□□□□□ -1.3
COL20A1Q9P218 RN7SL269P-201ENST00000467795 305 ntBASIC6.95□□□□□ -1.3
COL20A1Q9P218 UBFD1P1-201ENST00000473259 814 ntBASIC6.95□□□□□ -1.3
COL20A1Q9P218 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
COL20A1Q9P218 RNA5SP400-201ENST00000517155 111 ntBASIC6.95□□□□□ -1.3
COL20A1Q9P218 AC104997.1-201ENST00000519761 717 ntBASIC6.95□□□□□ -1.3
COL20A1Q9P218 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.95□□□□□ -1.3
COL20A1Q9P218 IGHV1-14-201ENST00000523391 241 ntBASIC6.95□□□□□ -1.3
COL20A1Q9P218 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC6.95□□□□□ -1.3
COL20A1Q9P218 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC6.95□□□□□ -1.3
COL20A1Q9P218 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.95□□□□□ -1.3
COL20A1Q9P218 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.95□□□□□ -1.3
COL20A1Q9P218 AC090236.2-201ENST00000587933 1101 ntBASIC6.95□□□□□ -1.3
COL20A1Q9P218 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.95□□□□□ -1.3
COL20A1Q9P218 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC6.95□□□□□ -1.3
COL20A1Q9P218 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.95□□□□□ -1.3
COL20A1Q9P218 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.95□□□□□ -1.3
COL20A1Q9P218 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.95□□□□□ -1.3
COL20A1Q9P218 AL450226.2-201ENST00000622913 439 ntBASIC6.95□□□□□ -1.3
COL20A1Q9P218 AC129778.1-202ENST00000623812 261 ntBASIC6.95□□□□□ -1.3
COL20A1Q9P218 AL355480.1-201ENST00000629041 99 ntBASIC6.95□□□□□ -1.3
COL20A1Q9P218 AL591379.1-207ENST00000635982 261 ntBASIC6.95□□□□□ -1.3
COL20A1Q9P218 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.95□□□□□ -1.3
COL20A1Q9P218 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
COL20A1Q9P218 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL20A1Q9P218 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.95□□□□□ -1.3
COL20A1Q9P218 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
COL20A1Q9P218 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.95□□□□□ -1.3
COL20A1Q9P218 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL20A1Q9P218 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL20A1Q9P218 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
COL20A1Q9P218 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL20A1Q9P218 AC092724.1-201ENST00000624623 3397 ntBASIC6.94□□□□□ -1.3
COL20A1Q9P218 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL20A1Q9P218 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.94□□□□□ -1.3
COL20A1Q9P218 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.94□□□□□ -1.3
COL20A1Q9P218 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
COL20A1Q9P218 AC096921.2-201ENST00000561507 1916 ntBASIC6.94□□□□□ -1.3
COL20A1Q9P218 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
COL20A1Q9P218 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL20A1Q9P218 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL20A1Q9P218 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.94□□□□□ -1.3
COL20A1Q9P218 RPS15AP30-201ENST00000420976 390 ntBASIC6.94□□□□□ -1.3
COL20A1Q9P218 AL445528.1-201ENST00000426330 420 ntBASIC6.94□□□□□ -1.3
COL20A1Q9P218 AL390879.2-203ENST00000426943 1121 ntBASIC6.94□□□□□ -1.3
COL20A1Q9P218 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.94□□□□□ -1.3
COL20A1Q9P218 PCBP2P1-201ENST00000437262 977 ntBASIC6.94□□□□□ -1.3
COL20A1Q9P218 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC6.94□□□□□ -1.3
COL20A1Q9P218 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.94□□□□□ -1.3
COL20A1Q9P218 VN1R110P-201ENST00000438988 971 ntBASIC6.94□□□□□ -1.3
COL20A1Q9P218 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL20A1Q9P218 AL445466.1-201ENST00000448432 357 ntBASIC6.94□□□□□ -1.3
COL20A1Q9P218 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.94□□□□□ -1.3
COL20A1Q9P218 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms