Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.33□□□□□ -1.24
HMG20BQ9P0W2 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.33□□□□□ -1.24
HMG20BQ9P0W2 AP003789.1-201ENST00000617737 605 ntBASIC7.33□□□□□ -1.24
HMG20BQ9P0W2 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.33□□□□□ -1.24
HMG20BQ9P0W2 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
HMG20BQ9P0W2 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
HMG20BQ9P0W2 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
HMG20BQ9P0W2 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
HMG20BQ9P0W2 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
HMG20BQ9P0W2 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.33□□□□□ -1.24
HMG20BQ9P0W2 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
HMG20BQ9P0W2 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC7.33□□□□□ -1.24
HMG20BQ9P0W2 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
HMG20BQ9P0W2 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 RN7SKP77-201ENST00000363261 353 ntBASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 RNU1-59P-201ENST00000364829 162 ntBASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 AC245884.2-201ENST00000426257 404 ntBASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 UGT2A3P7-201ENST00000510485 734 ntBASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 LDHBP3-201ENST00000514909 822 ntBASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 OR56A7P-201ENST00000524865 941 ntBASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 OTX2-203ENST00000554559 715 ntTSL 5 BASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 AC018558.5-201ENST00000565840 952 ntBASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 U1.25-201ENST00000614085 162 ntBASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 U1.34-201ENST00000618578 162 ntBASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 U1.31-201ENST00000620022 160 ntBASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 5S_rRNA.28-201ENST00000638107 119 ntBASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 AC009135.2-201ENST00000624136 1768 ntBASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 AL355377.1-201ENST00000621125 1653 ntBASIC7.32□□□□□ -1.24
HMG20BQ9P0W2 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.31□□□□□ -1.24
HMG20BQ9P0W2 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
HMG20BQ9P0W2 AC012254.3-201ENST00000591183 2117 ntBASIC7.31□□□□□ -1.24
HMG20BQ9P0W2 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC7.31□□□□□ -1.24
HMG20BQ9P0W2 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
HMG20BQ9P0W2 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
HMG20BQ9P0W2 AL121768.1-201ENST00000613917 2544 ntBASIC7.31□□□□□ -1.24
HMG20BQ9P0W2 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
HMG20BQ9P0W2 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.31□□□□□ -1.24
HMG20BQ9P0W2 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC7.31□□□□□ -1.24
HMG20BQ9P0W2 RNA5-8SP5-201ENST00000365304 152 ntBASIC7.31□□□□□ -1.24
HMG20BQ9P0W2 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
HMG20BQ9P0W2 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
HMG20BQ9P0W2 RNU4-64P-201ENST00000410795 131 ntBASIC7.31□□□□□ -1.24
HMG20BQ9P0W2 KIF4CP-201ENST00000422742 1279 ntBASIC7.31□□□□□ -1.24
HMG20BQ9P0W2 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC7.31□□□□□ -1.24
HMG20BQ9P0W2 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC7.31□□□□□ -1.24
HMG20BQ9P0W2 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
HMG20BQ9P0W2 PSMA2P2-201ENST00000504319 686 ntBASIC7.31□□□□□ -1.24
HMG20BQ9P0W2 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC7.31□□□□□ -1.24
HMG20BQ9P0W2 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC7.31□□□□□ -1.24
HMG20BQ9P0W2 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC7.31□□□□□ -1.24
HMG20BQ9P0W2 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.31□□□□□ -1.24
HMG20BQ9P0W2 MIR4776-2-201ENST00000580204 80 ntBASIC7.31□□□□□ -1.24
HMG20BQ9P0W2 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC7.31□□□□□ -1.24
HMG20BQ9P0W2 AL136131.3-201ENST00000607600 188 ntBASIC7.31□□□□□ -1.24
HMG20BQ9P0W2 AC016590.3-201ENST00000611171 753 ntBASIC7.31□□□□□ -1.24
HMG20BQ9P0W2 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.31□□□□□ -1.24
HMG20BQ9P0W2 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
HMG20BQ9P0W2 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
HMG20BQ9P0W2 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
HMG20BQ9P0W2 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
HMG20BQ9P0W2 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
HMG20BQ9P0W2 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC7.3□□□□□ -1.24
HMG20BQ9P0W2 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
HMG20BQ9P0W2 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
HMG20BQ9P0W2 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC7.3□□□□□ -1.24
HMG20BQ9P0W2 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
HMG20BQ9P0W2 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC7.3□□□□□ -1.24
HMG20BQ9P0W2 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
HMG20BQ9P0W2 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.3□□□□□ -1.24
HMG20BQ9P0W2 OR10R3P-201ENST00000361688 942 ntBASIC7.3□□□□□ -1.24
HMG20BQ9P0W2 RN7SKP269-201ENST00000365545 319 ntBASIC7.3□□□□□ -1.24
HMG20BQ9P0W2 PPCS-201ENST00000372556 984 ntTSL 2 BASIC7.3□□□□□ -1.24
HMG20BQ9P0W2 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
HMG20BQ9P0W2 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
HMG20BQ9P0W2 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.3□□□□□ -1.24
HMG20BQ9P0W2 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.3□□□□□ -1.24
HMG20BQ9P0W2 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms