Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 MTND3P23-201ENST00000431980 347 ntBASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 Z83313.1-201ENST00000433780 718 ntBASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 UBE2V1P8-201ENST00000437166 265 ntBASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 SEPHS1P4-201ENST00000446112 1176 ntBASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 CDY11P-201ENST00000447168 1651 ntBASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 MTND2P24-201ENST00000453434 806 ntBASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 RN7SL180P-201ENST00000466769 294 ntBASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 RPL34P33-201ENST00000486062 334 ntBASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 RN7SL869P-201ENST00000497032 300 ntBASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 AC116347.2-201ENST00000514912 523 ntBASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 AP004247.1-201ENST00000531556 1289 ntBASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 AC118273.2-201ENST00000532092 465 ntBASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 MELK-207ENST00000536860 2342 ntTSL 2 BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 ARHGAP42P4-201ENST00000549782 2934 ntBASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 RN7SL14P-201ENST00000579715 298 ntBASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 RN7SL237P-201ENST00000580912 287 ntBASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 AC103881.1-201ENST00000603476 538 ntBASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 AC010857.1-201ENST00000606398 594 ntBASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 U4.5-201ENST00000617137 123 ntBASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 AC005840.5-201ENST00000619166 599 ntBASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 MIR6829-201ENST00000620375 67 ntBASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 AC011815.3-201ENST00000624194 473 ntBASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 AC024023.1-201ENST00000624530 922 ntBASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 AC241377.2-202ENST00000636462 997 ntBASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
BHLHE41Q9C0J9 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 AC009948.3-201ENST00000603415 1798 ntBASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 MTHFD1P1-201ENST00000413059 2764 ntBASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 Y_RNA.18-201ENST00000362461 102 ntBASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 RNY4P24-201ENST00000362735 96 ntBASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 SNORA35-201ENST00000386104 128 ntBASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 RPS27AP11-201ENST00000402798 447 ntBASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 VN1R12P-201ENST00000403778 876 ntBASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 AL109918.1-202ENST00000406724 436 ntBASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 CLEC1A-203ENST00000420265 1165 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 OR5W1P-201ENST00000423705 938 ntBASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 Z68868.1-201ENST00000429048 544 ntBASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 FAM96AP1-201ENST00000430879 482 ntBASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 YWHAEP5-201ENST00000431545 765 ntBASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 TRIM60P18-201ENST00000441518 828 ntBASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 RPL5P10-201ENST00000445207 894 ntBASIC7.13□□□□□ -1.27
BHLHE41Q9C0J9 EEF1E1P1-201ENST00000446998 430 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms