Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC063955.1-201ENST00000462872 685 ntBASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 AC108729.1-201ENST00000487812 947 ntBASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 AC118282.1-201ENST00000506408 765 ntBASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 C1DP5-201ENST00000525775 383 ntBASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 AP005639.1-201ENST00000526939 192 ntBASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 C1GALT1P1-201ENST00000548895 1089 ntBASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 AC096947.1-201ENST00000603233 470 ntBASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 MIR6070-201ENST00000613967 103 ntBASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 AC007671.1-201ENST00000616957 830 ntBASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 RMST_5.1-201ENST00000618704 126 ntBASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 AC090506.2-201ENST00000624521 419 ntBASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 AC019080.5-201ENST00000624891 757 ntBASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 AC068769.1-201ENST00000474767 2426 ntBASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 SAMM50P1-201ENST00000455403 1399 ntBASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 RAD1P1-201ENST00000231383 813 ntBASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 SNORD8-201ENST00000363915 110 ntBASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 RPL5P20-201ENST00000403848 896 ntBASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 AL353133.1-201ENST00000407695 401 ntBASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 RNA5SP155-201ENST00000411154 129 ntBASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 ARL2BPP3-201ENST00000421226 480 ntBASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 AC097721.1-201ENST00000427150 1253 ntBASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 NPM1P9-201ENST00000453156 844 ntBASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 RPL23AP64-201ENST00000469465 435 ntBASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 AC022415.1-202ENST00000486612 523 ntBASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 NAMPTP2-201ENST00000505629 1115 ntBASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 AC093325.1-201ENST00000508378 326 ntBASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 OR56A7P-201ENST00000524865 941 ntBASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 AC005519.1-201ENST00000554490 601 ntBASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 AL121839.1-201ENST00000556233 1185 ntBASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 AC092718.4-201ENST00000566639 716 ntBASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 RN7SL32P-201ENST00000580514 281 ntBASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 AC068620.3-201ENST00000602749 560 ntBASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 AP004372.1-201ENST00000604842 844 ntBASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 AC114477.1-201ENST00000605097 605 ntBASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 AC019257.2-201ENST00000605539 497 ntBASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 AC034236.3-201ENST00000605999 461 ntBASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 SNORD96A-201ENST00000606577 79 ntBASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 AL592494.3-201ENST00000609485 464 ntBASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 MIR8084-201ENST00000614105 89 ntBASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 MIR6883-201ENST00000614952 78 ntBASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 AC004801.6-201ENST00000616571 978 ntBASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 AC068880.4-201ENST00000623082 495 ntBASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 AC073488.9-201ENST00000631601 754 ntBASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 AL591135.1-201ENST00000401578 5914 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms