Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 RNU6-560P-201ENST00000364007 108 ntBASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 OR1L1-202ENST00000373686 1083 ntBASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 MRPL32P1-201ENST00000406301 247 ntBASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 AL662791.3-201ENST00000413771 776 ntBASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 VDAC1P2-201ENST00000423609 850 ntBASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 RPL5P6-201ENST00000425640 886 ntBASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 DPRXP1-201ENST00000426312 460 ntBASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 FTH1P10-202ENST00000430907 550 ntBASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 RPL29P7-201ENST00000440227 457 ntBASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 AC079781.1-201ENST00000441505 394 ntBASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 TPTE2P6-202ENST00000445572 1007 ntBASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 AC090058.1-201ENST00000498788 435 ntBASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 IGBP1P5-201ENST00000507524 1000 ntBASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 AC090819.1-201ENST00000523800 1111 ntBASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 ERP27-202ENST00000540097 993 ntTSL 2 BASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 FCF1-203ENST00000553615 954 ntTSL 3 BASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 AC008015.1-201ENST00000555505 465 ntBASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 LINC00556-201ENST00000569603 412 ntBASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 AC040904.1-201ENST00000590850 223 ntBASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 AC121247.2-201ENST00000604776 136 ntBASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 HOTTIP_2.1-201ENST00000616633 376 ntBASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 AP000550.3-201ENST00000637734 379 ntBASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 IFIT1P1-201ENST00000400497 1449 ntBASIC8.03□□□□□ -1.12
TRAIPQ9BWF2 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
TRAIPQ9BWF2 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC8.02□□□□□ -1.12
TRAIPQ9BWF2 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC8.02□□□□□ -1.12
TRAIPQ9BWF2 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.12
TRAIPQ9BWF2 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
TRAIPQ9BWF2 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
TRAIPQ9BWF2 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
TRAIPQ9BWF2 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 PARN-201ENST00000341484 2100 ntTSL 2 BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 AC093844.1-201ENST00000514910 1361 ntBASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 HMGB1P5-201ENST00000255320 642 ntBASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 FDPSP1-201ENST00000424976 1071 ntBASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 RPL21P43-201ENST00000425440 472 ntBASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 OR52S1P-201ENST00000427016 937 ntBASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 PPIAP17-201ENST00000438507 471 ntBASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 UBE2V1P5-201ENST00000440070 405 ntBASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 CUBNP2-201ENST00000443534 1139 ntBASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 TREML3P-201ENST00000457327 501 ntBASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 GAPDHP39-201ENST00000481866 979 ntBASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 AC098799.3-201ENST00000506095 438 ntBASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 RNU6-1129P-201ENST00000515964 104 ntBASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 RPS20-202ENST00000518875 671 ntTSL 2 BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 AL356057.1-201ENST00000533798 831 ntBASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 AP000619.3-201ENST00000535634 1127 ntBASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 AC126177.6-201ENST00000550420 1009 ntBASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 GNG2-215ENST00000557376 573 ntTSL 4 BASIC8.02□□□□□ -1.13
TRAIPQ9BWF2 OR4C49P-201ENST00000563891 900 ntBASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms