Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 AL133243.2-201ENST00000610331 1621 ntBASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 AL132656.3-201ENST00000606384 1595 ntBASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 RNA5SP375-201ENST00000362975 119 ntBASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 GNG5P5-201ENST00000420444 220 ntBASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 AC112492.2-201ENST00000432774 1030 ntBASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 SUMO2P8-201ENST00000434672 286 ntBASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 AC010240.2-201ENST00000445363 1205 ntBASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 CBX1P2-201ENST00000453841 458 ntBASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 AC079080.1-201ENST00000479841 822 ntBASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 RN7SL413P-201ENST00000482700 297 ntBASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 AC078899.1-201ENST00000521432 1185 ntBASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 OR4C49P-201ENST00000563891 900 ntBASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 AC090826.1-203ENST00000569235 490 ntBASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 AC092944.2-201ENST00000605443 889 ntBASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 FAM72A-208ENST00000607379 1139 ntBASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 AC016252.1-201ENST00000609721 474 ntBASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 AC015712.7-201ENST00000615211 635 ntBASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 AL353684.1-201ENST00000622677 1120 ntBASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 AC103703.1-201ENST00000634783 663 ntBASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 ZNF710-AS1-202ENST00000620791 2133 ntBASIC5.86□□□□□ -1.47
CCDC28BQ9BUN5 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 MRRFP1-201ENST00000435941 1675 ntBASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 RNU105B-201ENST00000364478 208 ntBASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 RN7SKP39-201ENST00000410773 322 ntBASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 RPS15AP30-201ENST00000420976 390 ntBASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 GTF3AP6-201ENST00000432585 986 ntBASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 AL356133.1-201ENST00000444762 372 ntBASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 FRG2FP-204ENST00000453982 852 ntBASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 AC069304.1-201ENST00000491593 704 ntBASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 AC093664.1-201ENST00000511779 289 ntBASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 MINOS1P4-201ENST00000515470 318 ntBASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 AC130366.1-201ENST00000526505 1192 ntBASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 AP001994.1-201ENST00000527539 826 ntBASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 RPL41P2-201ENST00000544920 409 ntBASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 AC026898.1-201ENST00000586404 571 ntBASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 AC007786.3-201ENST00000615154 596 ntBASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 MIR6732-201ENST00000619365 60 ntBASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 AL121985.3-201ENST00000620690 523 ntBASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 AC103564.3-201ENST00000621194 220 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms