Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SSX3Q99909 RN7SKP296-201ENST00000411185 341 ntBASIC5.37□□□□□ -1.55
SSX3Q99909 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.37□□□□□ -1.55
SSX3Q99909 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SSX3Q99909 HMGB1P32-201ENST00000425971 565 ntBASIC5.37□□□□□ -1.55
SSX3Q99909 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSX3Q99909 CLNS1AP1-201ENST00000435954 682 ntBASIC5.37□□□□□ -1.55
SSX3Q99909 AC128677.1-201ENST00000436016 442 ntBASIC5.37□□□□□ -1.55
SSX3Q99909 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.37□□□□□ -1.55
SSX3Q99909 CRYGGP-201ENST00000443337 145 ntBASIC5.37□□□□□ -1.55
SSX3Q99909 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.37□□□□□ -1.55
SSX3Q99909 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSX3Q99909 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSX3Q99909 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.37□□□□□ -1.55
SSX3Q99909 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.37□□□□□ -1.55
SSX3Q99909 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.37□□□□□ -1.55
SSX3Q99909 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.37□□□□□ -1.55
SSX3Q99909 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SSX3Q99909 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.37□□□□□ -1.55
SSX3Q99909 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
SSX3Q99909 AC037479.1-201ENST00000558361 625 ntBASIC5.37□□□□□ -1.55
SSX3Q99909 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC5.37□□□□□ -1.55
SSX3Q99909 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.37□□□□□ -1.55
SSX3Q99909 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSX3Q99909 AC009303.3-201ENST00000591103 736 ntBASIC5.37□□□□□ -1.55
SSX3Q99909 OR7M1P-201ENST00000608946 533 ntBASIC5.37□□□□□ -1.55
SSX3Q99909 AC073389.3-201ENST00000609434 935 ntBASIC5.37□□□□□ -1.55
SSX3Q99909 U1.25-201ENST00000614085 162 ntBASIC5.37□□□□□ -1.55
SSX3Q99909 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.37□□□□□ -1.55
SSX3Q99909 U1.31-201ENST00000620022 160 ntBASIC5.37□□□□□ -1.55
SSX3Q99909 AC074140.1-201ENST00000621617 208 ntBASIC5.37□□□□□ -1.55
SSX3Q99909 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.37□□□□□ -1.55
SSX3Q99909 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.37□□□□□ -1.55
SSX3Q99909 OR8A1-204ENST00000642111 1145 ntBASIC5.37□□□□□ -1.55
SSX3Q99909 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.37□□□□□ -1.55
SSX3Q99909 PSMC1P4-201ENST00000515236 1327 ntBASIC5.37□□□□□ -1.55
SSX3Q99909 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.37□□□□□ -1.55
SSX3Q99909 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.37□□□□□ -1.55
SSX3Q99909 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSX3Q99909 AC092724.1-201ENST00000624623 3397 ntBASIC5.37□□□□□ -1.55
SSX3Q99909 MTCO1P15-201ENST00000529569 1526 ntBASIC5.37□□□□□ -1.55
SSX3Q99909 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSX3Q99909 SMG1P5-202ENST00000529428 4219 ntBASIC5.37□□□□□ -1.55
SSX3Q99909 SMG1P2-201ENST00000566127 4221 ntBASIC5.37□□□□□ -1.55
SSX3Q99909 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSX3Q99909 AP005432.1-201ENST00000580891 3485 ntBASIC5.36□□□□□ -1.55
SSX3Q99909 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SSX3Q99909 AC093278.2-201ENST00000564956 2485 ntBASIC5.36□□□□□ -1.55
SSX3Q99909 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.36□□□□□ -1.55
SSX3Q99909 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
SSX3Q99909 RPL24P4-201ENST00000326586 421 ntBASIC5.36□□□□□ -1.55
SSX3Q99909 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.36□□□□□ -1.55
SSX3Q99909 RNU6-697P-201ENST00000363348 107 ntBASIC5.36□□□□□ -1.55
SSX3Q99909 RNA5SP85-201ENST00000365378 119 ntBASIC5.36□□□□□ -1.55
SSX3Q99909 SNORA64.3-201ENST00000365647 134 ntBASIC5.36□□□□□ -1.55
SSX3Q99909 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSX3Q99909 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SSX3Q99909 RN7SKP221-201ENST00000410420 301 ntBASIC5.36□□□□□ -1.55
SSX3Q99909 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.36□□□□□ -1.55
SSX3Q99909 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.36□□□□□ -1.55
SSX3Q99909 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.36□□□□□ -1.55
SSX3Q99909 GNG5P5-201ENST00000420444 220 ntBASIC5.36□□□□□ -1.55
SSX3Q99909 GPN3P1-201ENST00000423883 535 ntBASIC5.36□□□□□ -1.55
SSX3Q99909 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.36□□□□□ -1.55
SSX3Q99909 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.36□□□□□ -1.55
SSX3Q99909 AC092106.2-201ENST00000436597 487 ntBASIC5.36□□□□□ -1.55
SSX3Q99909 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSX3Q99909 AL355355.1-201ENST00000442900 793 ntBASIC5.36□□□□□ -1.55
SSX3Q99909 AC234771.2-201ENST00000445718 597 ntBASIC5.36□□□□□ -1.55
SSX3Q99909 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.36□□□□□ -1.55
SSX3Q99909 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SSX3Q99909 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SSX3Q99909 OR52H2P-201ENST00000514607 902 ntBASIC5.36□□□□□ -1.55
SSX3Q99909 RNU6-551P-201ENST00000516661 103 ntBASIC5.36□□□□□ -1.55
SSX3Q99909 PVT1-214ENST00000522875 922 ntTSL 5 BASIC5.36□□□□□ -1.55
SSX3Q99909 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.36□□□□□ -1.55
SSX3Q99909 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.36□□□□□ -1.55
SSX3Q99909 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.36□□□□□ -1.55
SSX3Q99909 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SSX3Q99909 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.36□□□□□ -1.55
SSX3Q99909 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.36□□□□□ -1.55
SSX3Q99909 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.36□□□□□ -1.55
SSX3Q99909 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.36□□□□□ -1.55
SSX3Q99909 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.36□□□□□ -1.55
SSX3Q99909 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.36□□□□□ -1.55
SSX3Q99909 AC006363.1-201ENST00000603806 463 ntBASIC5.36□□□□□ -1.55
SSX3Q99909 AC079791.1-201ENST00000605356 973 ntBASIC5.36□□□□□ -1.55
SSX3Q99909 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC5.36□□□□□ -1.55
SSX3Q99909 AC068726.1-201ENST00000610993 341 ntBASIC5.36□□□□□ -1.55
SSX3Q99909 AL137246.2-201ENST00000613439 662 ntBASIC5.36□□□□□ -1.55
SSX3Q99909 Six3os1_4.1-201ENST00000615706 324 ntBASIC5.36□□□□□ -1.55
SSX3Q99909 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.36□□□□□ -1.55
SSX3Q99909 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSX3Q99909 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SSX3Q99909 AC144833.1-201ENST00000567953 4089 ntBASIC5.36□□□□□ -1.55
SSX3Q99909 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SSX3Q99909 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSX3Q99909 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSX3Q99909 AC023245.2-201ENST00000530760 2978 ntBASIC5.36□□□□□ -1.55
SSX3Q99909 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms